H00.0

Case	Control
229	459976

Case

Control

229

459976

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr11:119073404	rs12363253	-	G>A	20	12820	29.25	6.37e-08	3.217
chr7:56361121	rs73148024	-	G>A	43	39659	27.75	1.38e-07	2.267
chr8:2300743	rs13275971	-	A>C	21	14456	26.32	2.893e-07	2.975
chr9:22347320	rs116861085	-	A>G	38	34110	26.23	3.027e-07	2.318
chr14:101321515	rs1884541	-	C>T	71	81221	25.42	4.614e-07	1.895
chr8:2304730	rs71519873	-	T>C	26	20356	24.72	6.616e-07	2.624
chr4:23118935	rs6448189	-	C>A	18	11905	24.43	7.722e-07	3.087
chr2:207844829	rs12477676	-	A>G	19	13122	23.61	1.179e-06	2.956
chr3:9428363	rs74327255	THUMPD3	G>A	26	20908	23.3	1.386e-06	2.556
chr3:100717066	rs57779099	-	C>T	26	20914	23.21	1.451e-06	2.552
chr14:92326098	rs77751978	TC2N	T>C	80	96971	22.55	2.047e-06	1.774
chr9:82851844	rs17082973	-	T>C	57	62424	22.36	2.258e-06	1.925
chr11:127137851	rs111561986	-	G>A	37	34945	22.32	2.308e-06	2.198
chr12:92405815	rs12810806	-	A>G	162	235974	20.75	5.234e-06	1.544
chr9:3359278	rs74709399	RFX3	T>C	42	42733	20.49	5.985e-06	2.045
chr2:151868882	rs116769221	-	C>T	15	9859	20.46	6.079e-06	3.085
chr12:79836966	rs116985220	SYT1	G>A	16	10996	20.03	7.615e-06	2.958
chr1:64643794	rs41302752	ROR1	C>A	15	10058	19.77	8.744e-06	3.032
chr2:45760477	rs11899012	SRBD1	C>A	31	28704	19.76	8.781e-06	2.234
chr4:21174825	rs75448630	KCNIP4	C>G	24	19986	19.76	8.783e-06	2.46

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000598	Abnormality of the ear	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000726	Dementia	0/20
HP: 0001268	Mental deterioration	0/20
HP: 0001297	Stroke	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0002011	Morphological central nervous system abnormality	0/20
HP: 0002060	Abnormal cerebral morphology	0/20
HP: 0002076	Migraine	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002140	Ischemic stroke	0/20
HP: 0002315	Headache	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002637	Cerebral ischemia	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0009145	Abnormal cerebral artery morphology	0/20
HP: 0011004	Abnormal systemic arterial morphology	0/20
HP: 0011446	Abnormality of higher mental function	0/20
HP: 0012443	Abnormality of brain morphology	0/20
HP: 0012531	Pain	0/20
HP: 0012638	Abnormal nervous system physiology	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012735	Cough	0/20
HP: 0025015	Abnormal vascular morphology	0/20
HP: 0025142	Constitutional symptom	0/20
HP: 0030680	Abnormality of cardiovascular system morphology	0/20
HP: 0030766	Ear pain	0/20
HP: 0031416	Abnormal nasal mucus secretion	0/20
HP: 0031417	Rhinorrhea	0/20
HP: 0031704	Abnormal ear physiology	0/20
HP: 0100314	Cerebral inclusion bodies	0/20
HP: 0100315	Lewy bodies	0/20
HP: 0100543	Cognitive impairment	0/20
HP: 0100545	Arterial stenosis	0/20
HP: 0100547	Abnormality of forebrain morphology	0/20
HP: 0100659	Abnormality of the cerebral vasculature	0/20

Name

Top Correlation

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000152

Abnormality of head or neck

0/20

HP: 0000234

Abnormality of the head

0/20

HP: 0000598