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ICD-10
HPO
Compare GWAS
Super Class
Other cataract
Sub Class
Complicated cataract
H26.2
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
140
460065
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr12:67068708
rs7310363
GRIP1
G>A
20
15391
47.77
4.781e-12
4.327
chr5:1687054
rs114454807
-
G>A
16
13695
31.91
1.614e-08
3.846
chr5:165567958
rs80272978
-
G>A
15
13100
28.71
8.396e-08
3.748
chr13:105993576
rs12856232
-
C>T
26
30532
28.61
8.856e-08
2.852
chr6:113046843
rs17815180
-
T>C
16
15217
26.64
2.452e-07
3.471
chr6:64838714
rs113534026
EYS
G>A
21
22996
26.56
2.552e-07
3.028
chr17:2520420
rs118129762
PAFAH1B1
A>G
15
14381
24.65
6.864e-07
3.439
chr10:115389180
rs2286739
NRAP
A>C
137
307078
23.84
1.045e-06
1.738
chr9:86913493
rs117077680
SLC28A3
T>G
14
13422
22.72
1.872e-06
3.409
chr21:21787598
rs74902106
-
G>C
24
30298
22.46
2.14e-06
2.637
chr10:115389366
rs2286735
NRAP
G>A
135
304725
22.46
2.141e-06
1.712
chr14:61029936
rs1955698
-
T>C
60
107753
22.38
2.233e-06
1.953
chr14:30485141
rs78897450
PRKD1
A>G
16
16674
22.17
2.495e-06
3.145
chr4:25487869
rs7694097
-
A>G
19
21761
22.15
2.527e-06
2.899
chr15:36257150
rs16962102
-
T>C
18
19956
22.14
2.536e-06
2.971
chr6:75916542
rs72878542
-
A>G
16
16713
22.07
2.628e-06
3.138
chr14:60970531
rs2224410
C14orf39
C>T
53
93777
20.85
4.963e-06
1.968
chr5:86418751
rs2624171
-
A>G
41
238659
20.85
4.976e-06
0.4731
chr6:63253490
rs12663046
-
C>T
17
18909
20.72
5.315e-06
2.952
chr9:124688608
rs9408932
TTLL11
G>A
20
24053
20.71
5.352e-06
2.744
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0007795
Anterior cortical cataract
20/20
HP: 0008802
Hypoplasia of the femoral head
18/20
HP: 0010923
Anterior subcapsular cataract
20/20
HP: 0011488
Abnormal corneal endothelium morphology
1/20
HP: 0011490
Abnormal Descemet membrane morphology
2/20
HP: 0012038
Corneal guttata
2/20
HP: 0100017
Capsular cataract
20/20
HP: 0100020
Posterior capsular cataract
20/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000152
Abnormality of head or neck
0/20
HP: 0000234
Abnormality of the head
0/20
HP: 0000271
Abnormality of the face
0/20
HP: 0000478
Abnormality of the eye
0/20
HP: 0000479
Abnormal retinal morphology
0/20
HP: 0000481
Abnormal cornea morphology
0/20
HP: 0000517
Abnormality of the lens
0/20
HP: 0000518
Cataract
0/20
HP: 0000523
Subcapsular cataract
0/20
HP: 0000707
Abnormality of the nervous system
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0000969
Edema
0/20
HP: 0001098
Abnormal fundus morphology
0/20
HP: 0001103
Abnormal macular morphology
0/20
HP: 0001939
Abnormality of metabolism/homeostasis
0/20
HP: 0002644
Abnormality of pelvic girdle bone morphology
0/20
HP: 0002813
Abnormality of limb bone morphology
0/20
HP: 0002814
Abnormality of the lower limb
0/20
HP: 0002823
Abnormality of femur morphology
0/20
HP: 0003366
Abnormality of the femoral neck or head region
0/20
HP: 0003368
Abnormality of the femoral head
0/20
HP: 0004328
Abnormal anterior eye segment morphology
0/20
HP: 0004329
Abnormal posterior eye segment morphology
0/20
HP: 0005613
Aplasia/hypoplasia of the femur
0/20
HP: 0005930
Abnormality of epiphysis morphology
0/20
HP: 0006493
Aplasia/hypoplasia involving bones of the lower limbs
0/20
HP: 0006499
Abnormality of femoral epiphysis
0/20
HP: 0006500
Abnormality of lower limb epiphysis morphology
0/20
HP: 0006505
Abnormality of limb epiphysis morphology
0/20
HP: 0009103
Aplasia/Hypoplasia involving the pelvis
0/20
HP: 0009108
Aplasia/Hypoplasia involving the femoral head and neck
0/20
HP: 0009115
Aplasia/hypoplasia involving the skeleton
0/20
HP: 0009815
Aplasia/hypoplasia of the extremities
0/20
HP: 0009816
Lower limb undergrowth
0/20
HP: 0009826
Limb undergrowth
0/20
HP: 0010920
Zonular cataract
0/20
HP: 0011032
Abnormality of fluid regulation
0/20
HP: 0011314
Abnormality of long bone morphology
0/20
HP: 0011505
Cystoid macular edema
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0011844
Abnormal appendicular skeleton morphology
0/20
HP: 0012337
Abnormal homeostasis
0/20
HP: 0012372
Abnormal eye morphology
0/20
HP: 0012639
Abnormal nervous system morphology
0/20
HP: 0030498
Macular thickening
0/20
HP: 0040049
Macular edema
0/20
HP: 0040064
Abnormality of limbs
0/20
HP: 0040068
Abnormality of limb bone
0/20
HP: 0040069
Abnormal lower limb bone morphology
0/20
HP: 0045060
Aplasia/hypoplasia involving bones of the extremities
0/20
HP: 0100019
Cortical cataract
0/20