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ICD-10
HPO
Compare GWAS
Super Class
Disorders of vitreous body
Sub Class
Other vitreous opacities
H43.3
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
390
459815
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr12:88783745
rs7303369
-
T>C
188
154292
36.31
1.684e-09
1.646
chr21:29827623
rs13049543
-
A>G
170
286754
25.52
4.374e-07
0.6482
chr16:77635695
rs116980813
-
G>C
27
13320
23.91
1.009e-06
2.522
chr18:42589714
rs10502850
SETBP1
G>A
72
50412
23.82
1.056e-06
1.812
chr18:75609502
rs34222783
-
C>T
186
163507
23.8
1.072e-06
1.5
chr6:104831053
rs12197128
-
C>T
37
93178
22.14
2.539e-06
0.4616
chr3:96932303
rs2317606
EPHA6
A>G
200
180631
22.1
2.592e-06
1.465
chr2:121263296
rs80260083
-
G>A
27
13772
21.96
2.779e-06
2.432
chr3:9554359
rs11710200
LHFPL4
T>C
62
42391
21.86
2.935e-06
1.839
chr20:2025089
rs117149764
-
T>C
29
15371
21.71
3.173e-06
2.353
chr9:18111955
rs117496002
ADAMTSL1
A>G
29
15350
21.69
3.203e-06
2.353
chr15:62748619
rs78205844
TLN2
G>C
72
51933
21.45
3.635e-06
1.76
chr6:156761260
rs62433808
-
C>T
42
25668
21.36
3.811e-06
2.05
chr12:5385379
rs2159602
-
C>T
223
349137
21.07
4.436e-06
0.6974
chr12:88739435
rs2111041
-
T>C
93
71987
21.05
4.471e-06
1.651
chr1:231344908
rs114415891
TRIM67
A>G
29
15667
20.55
5.822e-06
2.302
chr8:22831150
rs11784679
PEBP4
T>G
244
230712
20.5
5.953e-06
1.414
chr3:106396897
rs76143789
-
A>T
30
16563
20.25
6.783e-06
2.26
chr9:110494208
rs6477593
-
T>C
266
256478
20.09
7.391e-06
1.398
chr16:83252726
rs117596494
CDH13
G>A
33
18971
19.9
8.163e-06
2.169
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0005585
Spotty hyperpigmentation
20/20
HP: 0007643
Peripheral tractional retinal detachment
4/20
HP: 0007710
Peripheral vitreous opacities
20/20
HP: 0008030
Retinal arteritis
1/20
HP: 0011488
Abnormal corneal endothelium morphology
1/20
HP: 0025341
Corneal keratic precipitates
3/20
HP: 0031153
Membranous vitreous appearance
1/20
HP: 0100832
Vitreous floaters
4/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000152
Abnormality of head or neck
0/20
HP: 0000234
Abnormality of the head
0/20
HP: 0000271
Abnormality of the face
0/20
HP: 0000478
Abnormality of the eye
0/20
HP: 0000479
Abnormal retinal morphology
0/20
HP: 0000481
Abnormal cornea morphology
0/20
HP: 0000504
Abnormality of vision
0/20
HP: 0000541
Retinal detachment
0/20
HP: 0000593
Abnormal anterior chamber morphology
0/20
HP: 0000630
Abnormal retinal artery morphology
0/20
HP: 0000707
Abnormality of the nervous system
0/20
HP: 0000951
Abnormality of the skin
0/20
HP: 0000953
Hyperpigmentation of the skin
0/20
HP: 0001000
Abnormality of skin pigmentation
0/20
HP: 0001098
Abnormal fundus morphology
0/20
HP: 0001574
Abnormality of the integument
0/20
HP: 0001626
Abnormality of the cardiovascular system
0/20
HP: 0002597
Abnormality of the vasculature
0/20
HP: 0004327
Abnormal vitreous humor morphology
0/20
HP: 0004328
Abnormal anterior eye segment morphology
0/20
HP: 0004329
Abnormal posterior eye segment morphology
0/20
HP: 0007400
Irregular hyperpigmentation
0/20
HP: 0007833
Anterior chamber synechiae
0/20
HP: 0007917
Tractional retinal detachment
0/20
HP: 0008046
Abnormal retinal vascular morphology
0/20
HP: 0008047
Abnormality of the vasculature of the eye
0/20
HP: 0011004
Abnormal systemic arterial morphology
0/20
HP: 0011121
Abnormality of skin morphology
0/20
HP: 0011484
Posterior synechiae of the anterior chamber
0/20
HP: 0012089
Arteritis
0/20
HP: 0012372
Abnormal eye morphology
0/20
HP: 0012373
Abnormal eye physiology
0/20
HP: 0012639
Abnormal nervous system morphology
0/20
HP: 0025015
Abnormal vascular morphology
0/20
HP: 0025188
Retinal vasculitis
0/20
HP: 0025560
Anterior chamber cells
0/20
HP: 0030680
Abnormality of cardiovascular system morphology
0/20
HP: 3000036
Abnormality of head blood vessel
0/20
