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ICD-10
HPO
Compare GWAS
Super Class
Other diseases of inner ear
Sub Class
Labyrinthitis
H83.0
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
948
459257
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr8:58660438
rs34677260
-
C>T
64
16958
24.38
7.891e-07
1.856
chr1:87123130
rs72722208
-
T>C
97
29386
22.38
2.241e-06
1.63
chr5:157199547
rs12520912
-
G>A
781
329438
21.9
2.879e-06
1.238
chr7:114015707
rs12705960
FOXP2
A>C
1089
478078
21.8
3.021e-06
1.233
chr16:89167828
rs61729367
ACSF3
C>T
212
75972
20.78
5.156e-06
1.391
chr13:109144046
rs67264860
-
T>C
179
62554
20.28
6.695e-06
1.421
chr1:22787205
rs34218005
ZBTB40
A>G
108
34231
20.22
6.913e-06
1.556
chr13:76427253
rs73229904
LMO7
T>G
50
13026
20.01
7.71e-06
1.88
chr16:51334845
rs77612420
-
G>A
85
25939
19.94
8.002e-06
1.635
chr6:15734884
rs12213366
-
G>A
103
32444
19.68
9.141e-06
1.562
chr17:20991506
rs6587119
-
A>G
409
161605
19.49
1.012e-05
1.277
chr13:76387270
rs73227982
LMO7
T>G
50
13168
19.44
1.039e-05
1.864
chr13:89846656
rs2348445
-
T>C
210
134753
19.37
1.076e-05
0.7262
chr8:16071071
rs118007990
MSR1
G>A
52
13865
19.37
1.077e-05
1.841
chr10:125250651
rs7083744
-
G>A
139
46936
19.12
1.228e-05
1.466
chr8:61884210
rs73264731
-
G>A
45
11560
18.84
1.422e-05
1.905
chr14:57317919
rs72622491
-
G>A
58
16043
18.78
1.467e-05
1.769
chr17:78804359
rs58021271
RPTOR
G>A
54
14671
18.75
1.49e-05
1.804
chr10:131503352
rs61874312
MGMT
G>T
45
11592
18.7
1.529e-05
1.901
chr6:16048116
rs80297115
-
G>A
58
16096
18.64
1.575e-05
1.766
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000264
Abnormality of the mastoid
1/20
HP: 0000929
Abnormal skull morphology
1/20
HP: 0009911
Abnormal temporal bone morphology
1/20
HP: 0011376
Morphological abnormality of the vestibule of the inner ear
2/20
HP: 0011380
Morphological abnormality of the semicircular canal
1/20
HP: 0011381
Aplasia of the semicircular canal
2/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000152
Abnormality of head or neck
0/20
HP: 0000234
Abnormality of the head
0/20
HP: 0000265
Mastoiditis
0/20
HP: 0000359
Abnormality of the inner ear
0/20
HP: 0000364
Hearing abnormality
0/20
HP: 0000365
Hearing impairment
0/20
HP: 0000370
Abnormality of the middle ear
0/20
HP: 0000388
Otitis media
0/20
HP: 0000389
Chronic otitis media
0/20
HP: 0000407
Sensorineural hearing impairment
0/20
HP: 0000598
Abnormality of the ear
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0001751
Vestibular dysfunction
0/20
HP: 0002321
Vertigo
0/20
HP: 0002715
Abnormality of the immune system
0/20
HP: 0002754
Osteomyelitis
0/20
HP: 0008609
Morphological abnormality of the middle ear
0/20
HP: 0009121
Abnormal axial skeleton morphology
0/20
HP: 0010532
Paroxysmal vertigo
0/20
HP: 0010978
Abnormality of immune system physiology
0/20
HP: 0011389
Functional abnormality of the inner ear
0/20
HP: 0011390
Morphological abnormality of the inner ear
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0011843
Abnormality of skeletal physiology
0/20
HP: 0012647
Abnormal inflammatory response
0/20
HP: 0012649
Increased inflammatory response
0/20
HP: 0031703
Abnormal ear morphology
0/20
HP: 0031704
Abnormal ear physiology
0/20