J14

Case	Control
149	460045

Case

Control

149

460045

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr4:138063077	rs11735470	-	T>C	16	12346	37.27	1.027e-09	4.224
chr11:37696609	rs973994	-	C>A	49	71914	31.0	2.585e-08	2.319
chr11:37749065	rs1022300	-	C>T	44	62312	30.74	2.953e-08	2.409
chr2:34277073	rs114858795	-	G>A	22	22818	29.76	4.88e-08	3.137
chr8:94908847	rs35151463	PDP1	C>T	121	247577	28.56	9.095e-08	1.841
chr12:96964170	rs61940438	CFAP54	A>G	43	64270	26.15	3.165e-07	2.264
chr12:132970416	rs79502155	-	C>T	27	33857	24.64	6.899e-07	2.617
chr12:50369305	rs17124220	AQP6	G>A	15	14406	23.49	1.258e-06	3.347
chr12:50370409	rs12306363	AQP6	T>C	16	16023	23.13	1.515e-06	3.214
chr19:13888558	rs2901077	C19orf53	C>T	64	114100	22.92	1.693e-06	1.932
chr6:72634664	rs118017262	RIMS1	C>T	23	27694	22.79	1.808e-06	2.7
chr5:55756185	rs115931710	-	C>T	17	17719	22.68	1.915e-06	3.088
chr6:72847767	rs2463700	RIMS1	G>A	26	32867	22.25	2.39e-06	2.542
chr6:72973911	rs34354310	RIMS1	T>C	28	37549	22.18	2.483e-06	2.467
chr1:203147846	rs17531168	-	A>C	18	19594	22.05	2.653e-06	2.963
chr11:22894646	rs78459774	-	A>C	35	49228	21.98	2.748e-06	2.268
chr3:113336831	rs116838502	SIDT1	A>G	12	10586	21.82	2.997e-06	3.616
chr16:73007886	rs76461226	ZFHX3	A>G	29	39460	21.75	3.114e-06	2.412
chr3:134378076	rs28397879	EPHB1	C>T	15	15011	21.72	3.152e-06	3.211
chr12:132965870	rs74448124	-	C>T	25	32109	21.42	3.687e-06	2.538

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0032236	Increased circulating immature neutrophil count	5/20
HP: 0032239	Increased circulating band cell count	5/20

Name

Top Correlation

5/20

5/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0001871	Abnormality of blood and blood-forming tissues	0/20
HP: 0001874	Abnormality of neutrophils	0/20
HP: 0001881	Abnormal leukocyte morphology	0/20
HP: 0001911	Abnormal granulocyte morphology	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002088	Abnormal lung morphology	0/20
HP: 0002090	Pneumonia	0/20
HP: 0002205	Recurrent respiratory infections	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002783	Recurrent lower respiratory tract infections	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0006532	Recurrent pneumonia	0/20
HP: 0010974	Abnormal myeloid leukocyte morphology	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0010987	Abnormal cellular immune system morphology	0/20
HP: 0011893	Abnormal leukocyte count	0/20
HP: 0011947	Respiratory tract infection	0/20
HP: 0011991	Abnormal neutrophil count	0/20
HP: 0012252	Abnormal respiratory system morphology	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0012735	Cough	0/20
HP: 0031245	Productive cough	0/20
HP: 0032101	Unusual infection	0/20
HP: 0032251	Abnormal immune system morphology	0/20
HP: 0032309	Abnormal granulocyte count	0/20

Name

Top Correlation

0/20

0/20

0/20