Pneumonia due to staphylococcus
J15.2
Case/Control GWAS ⓘ
Statistics
| Case | Control |
|---|---|
| 101 | 460104 |
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
|---|---|---|---|---|---|---|---|---|
| chr8:54084755 | rs117744206 | - | G>A | 21 | 28971 | 33.21 | 8.257e-09 | 3.483 |
| chr1:237558819 | rs115179216 | RYR2 | G>A | 20 | 28142 | 31.87 | 1.648e-08 | 3.471 |
| chr8:62896244 | rs75652867 | - | A>G | 11 | 11437 | 28.99 | 7.287e-08 | 4.561 |
| chr5:917594 | rs115079969 | TRIP13 | G>T | 10 | 10460 | 26.16 | 3.149e-07 | 4.525 |
| chr10:83178907 | rs7082300 | - | C>T | 56 | 137934 | 25.37 | 4.723e-07 | 2.148 |
| chr11:29692317 | rs77300518 | - | C>T | 11 | 12343 | 25.27 | 4.994e-07 | 4.185 |
| chr2:208744168 | rs71418653 | PLEKHM3 | T>G | 17 | 24820 | 25.15 | 5.296e-07 | 3.306 |
| chr4:93141476 | rs114304580 | - | T>G | 12 | 14941 | 23.49 | 1.258e-06 | 3.813 |
| chr2:3833609 | rs115799947 | DCDC2C | G>T | 13 | 17000 | 23.45 | 1.284e-06 | 3.648 |
| chr7:30773636 | rs55898454 | INMT | C>T | 16 | 23642 | 23.08 | 1.555e-06 | 3.253 |
| chr1:150504821 | rs116171044 | - | G>A | 12 | 15739 | 22.64 | 1.949e-06 | 3.743 |
| chr1:237573762 | rs35968847 | RYR2 | AT>A | 19 | 31463 | 22.23 | 2.424e-06 | 2.946 |
| chr8:31859236 | rs55694684 | NRG1 | T>C | 42 | 97273 | 22.22 | 2.426e-06 | 2.205 |
| chr9:95838450 | rs76440435 | SUSD3 | C>T | 17 | 26674 | 22.2 | 2.458e-06 | 3.098 |
| chr12:16399520 | rs75380229 | SLC15A5 | A>C | 12 | 15536 | 21.89 | 2.894e-06 | 3.66 |
| chr4:39397291 | rs71606160 | - | T>C | 12 | 15644 | 21.71 | 3.169e-06 | 3.644 |
| chr13:25933025 | rs75775416 | - | C>A | 27 | 52969 | 21.66 | 3.248e-06 | 2.527 |
| chr2:75302306 | rs17564182 | TACR1 | C>G | 70 | 195094 | 21.52 | 3.499e-06 | 1.942 |
| chr1:150165642 | rs76198696 | - | A>G | 13 | 18102 | 21.51 | 3.521e-06 | 3.479 |
| chr8:32172010 | rs10503907 | NRG1 | A>G | 102 | 319325 | 21.47 | 3.602e-06 | 1.866 |
Associated Phenotypes ⓘ
| ID | Name | Top Correlation |
|---|