Pneumonia due to other streptococci
J15.4
Case/Control GWAS ⓘ
Statistics
| Case | Control |
|---|---|
| 92 | 460114 |
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
|---|---|---|---|---|---|---|---|---|
| chr9:13281895 | rs117836143 | - | G>A | 13 | 14541 | 35.11 | 3.114e-09 | 4.682 |
| chr7:18124420 | rs73075239 | - | G>A | 23 | 37676 | 32.34 | 1.292e-08 | 3.29 |
| chr7:48314151 | rs142391487 | ABCA13 | C>G | 10 | 10816 | 27.96 | 1.237e-07 | 4.737 |
| chr3:72387007 | rs9855049 | - | A>C | 49 | 122297 | 27.68 | 1.433e-07 | 2.323 |
| chr4:121970436 | rs114507985 | NDNF | A>G | 16 | 23322 | 27.41 | 1.646e-07 | 3.586 |
| chr17:63678666 | rs117338603 | CEP112 | G>A | 10 | 11333 | 26.52 | 2.603e-07 | 4.582 |
| chr5:134574275 | rs114656202 | - | C>T | 22 | 39559 | 25.29 | 4.929e-07 | 2.956 |
| chr4:112839123 | rs114922515 | - | C>A | 9 | 9839 | 24.76 | 6.486e-07 | 4.671 |
| chr8:14683156 | rs58636797 | SGCZ | C>A | 31 | 66687 | 24.68 | 6.775e-07 | 2.555 |
| chr13:75450341 | rs12868775 | - | G>A | 22 | 40422 | 24.12 | 9.072e-07 | 2.888 |
| chr8:14688648 | rs17120383 | SGCZ | T>C | 22 | 40588 | 24.0 | 9.623e-07 | 2.892 |
| chr17:72057587 | rs117162268 | - | C>A | 15 | 22847 | 23.7 | 1.127e-06 | 3.418 |
| chr12:102957182 | rs73173732 | - | A>G | 17 | 27841 | 23.45 | 1.281e-06 | 3.197 |
| chr16:65540229 | rs11864945 | - | T>C | 20 | 35742 | 22.83 | 1.771e-06 | 2.929 |
| chr4:175105220 | rs114980426 | - | C>A | 16 | 26547 | 21.72 | 3.151e-06 | 3.163 |
| chr10:130595233 | rs7082333 | - | T>G | 44 | 113801 | 21.34 | 3.85e-06 | 2.161 |
| chr3:16188468 | rs4685311 | - | G>A | 45 | 117124 | 21.31 | 3.917e-06 | 2.147 |
| chr9:17896998 | rs4961610 | - | C>T | 25 | 51614 | 21.26 | 4.015e-06 | 2.587 |
| chr12:102792314 | rs3730192 | IGF1 | T>C | 15 | 24460 | 21.2 | 4.139e-06 | 3.221 |
| chr13:50251125 | rs118007507 | EBPL | T>C | 10 | 12883 | 21.02 | 4.551e-06 | 3.963 |
Associated Phenotypes ⓘ
| ID | Name | Top Correlation |
|---|