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ICD-10
HPO
Compare GWAS
Super Class
Vasomotor and allergic rhinitis
Sub Class
Allergic rhinitis due to pollen
J30.1
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
1259
458946
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr15:48426484
rs1426654
SLC24A5
A>G
169
27357
107.4
3.709e-25
2.232
chr15:48392165
rs1834640
-
A>G
178
31446
88.08
6.288e-21
2.042
chr19:42393286
rs717225
ARHGEF1
A>G
129
21814
71.81
2.368e-17
2.114
chr14:31864485
rs7141532
HEATR5A
C>G
78
10889
70.21
5.326e-17
2.539
chr4:171653752
rs1522563
-
C>T
73
10028
68.49
1.277e-16
2.583
chr19:42391425
rs28521795
ARHGEF1
G>A
113
18709
66.68
3.199e-16
2.155
chr19:42392441
rs16975619
ARHGEF1
T>C
118
19892
66.29
3.891e-16
2.118
chr9:140957557
rs11137360
CACNA1B
A>G
122
20884
65.33
6.334e-16
2.083
chr5:147666044
rs7707813
-
T>C
112
18651
64.76
8.474e-16
2.138
chr3:122328753
rs2173764
PARP15
A>G
91
14028
64.49
9.709e-16
2.303
chr5:161844241
rs17052628
-
C>G
104
16944
64.23
1.11e-15
2.189
chr3:391100
rs13060847
CHL1
G>A
79
11575
64.06
1.206e-15
2.428
chr19:42392310
rs2288509
ARHGEF1
C>T
105
17439
62.98
2.093e-15
2.166
chr20:56796528
rs6015225
ANKRD60
A>T
75
10869
62.13
3.219e-15
2.449
chr3:149232489
rs7652887
-
C>T
90
14091
61.35
4.771e-15
2.268
chr16:7465748
rs4786166
RBFOX1
C>T
106
17688
61.12
5.36e-15
2.135
chr5:147671850
rs7724380
-
G>A
116
20067
60.24
8.386e-15
2.059
chr2:235130071
rs10177096
-
A>G
120
21130
59.34
1.326e-14
2.026
chr13:37450286
rs519447
SMAD9
C>T
73
10691
58.84
1.706e-14
2.42
chr3:123429182
rs820338
MYLK
C>T
104
17474
58.59
1.944e-14
2.116
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
2/20
HP: 0000152
Abnormality of head or neck
2/20
HP: 0000234
Abnormality of the head
2/20
HP: 0002086
Abnormality of the respiratory system
2/20
HP: 0002715
Abnormality of the immune system
1/20
HP: 0003193
Allergic rhinitis
10/20
HP: 0010978
Abnormality of immune system physiology
2/20
HP: 0012384
Rhinitis
4/20
HP: 0012395
Seasonal allergy
18/20
HP: 0410320
Animal protein allergy
17/20
HP: 0410321
Animal dander allergy
20/20
ID
Name
Top Correlation
HP: 0000271
Abnormality of the face
0/20
HP: 0000366
Abnormality of the nose
0/20
HP: 0001742
Nasal obstruction
0/20
HP: 0002795
Functional respiratory abnormality
0/20
HP: 0012393
Allergy
0/20
HP: 0031416
Abnormal nasal mucus secretion
0/20
HP: 0031417
Rhinorrhea
0/20
HP: 0100326
Immunologic hypersensitivity
0/20