J31.2

Case	Control
94	460112

Case

Control

460112

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr11:40260007	rs138999405	LRRC4C	G>A	16	19553	36.0	1.973e-09	4.208
chr14:59633677	rs4898980	-	G>A	14	18003	28.83	7.909e-08	3.962
chr7:120689531	rs62470955	CPED1	C>T	19	29460	28.62	8.817e-08	3.368
chr11:21600834	rs16908212	-	C>T	10	10503	28.28	1.05e-07	4.768
chr5:35836551	rs116730223	-	G>A	12	14556	27.13	1.902e-07	4.166
chr14:75535146	rs76623500	ACYP1	A>G	15	21414	25.74	3.914e-07	3.575
chr7:81223857	rs75806368	-	C>T	19	31043	25.25	5.039e-07	3.15
chr15:63051660	rs75789764	TLN2	C>G	19	31300	24.92	5.979e-07	3.129
chr4:177501251	rs72711979	-	C>A	14	19626	24.7	6.682e-07	3.621
chr15:101657447	rs2412071	-	A>C	18	29153	24.44	7.676e-07	3.177
chr9:14839651	rs66505117	FREM1	T>C	27	53989	24.19	8.736e-07	2.66
chr8:50225832	rs79129295	-	G>T	32	68639	23.89	1.018e-06	2.485
chr18:31119923	rs78987168	-	G>A	16	24798	23.55	1.22e-06	3.296
chr14:107010134	rs117404507	-	C>T	13	18194	23.19	1.465e-06	3.634
chr1:21037639	rs12049359	KIF17	C>T	27	54672	22.88	1.721e-06	2.593
chr10:49427090	rs182270663	FRMPD2	G>A	9	10190	22.73	1.868e-06	4.419
chr20:25035509	rs73906073	ACSS1	C>A	18	30403	22.36	2.262e-06	3.035
chr4:115801577	rs78919358	NDST4	T>C	12	16329	22.31	2.324e-06	3.708
chr5:32058992	rs111897548	PDZD2	G>T	10	12317	21.99	2.737e-06	4.071
chr4:37725528	rs12500523	-	C>T	12	16585	21.71	3.168e-06	3.651

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0005945	Laryngeal obstruction	1/20

Name

Top Correlation

HP: 0005945

Laryngeal obstruction

1/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000271	Abnormality of the face	0/20
HP: 0000366	Abnormality of the nose	0/20
HP: 0000600	Abnormality of the pharynx	0/20
HP: 0001600	Abnormality of the larynx	0/20
HP: 0001608	Abnormality of the voice	0/20
HP: 0001609	Hoarse voice	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0001739	Abnormality of the nasopharynx	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002087	Abnormality of the upper respiratory tract	0/20
HP: 0002088	Abnormal lung morphology	0/20
HP: 0002205	Recurrent respiratory infections	0/20
HP: 0002257	Chronic rhinitis	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002788	Recurrent upper respiratory tract infections	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011024	Abnormality of the gastrointestinal tract	0/20
HP: 0011110	Tonsillitis	0/20
HP: 0011947	Respiratory tract infection	0/20
HP: 0012252	Abnormal respiratory system morphology	0/20
HP: 0012384	Rhinitis	0/20
HP: 0012719	Functional abnormality of the gastrointestinal tract	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025032	Abnormality of digestive system physiology	0/20
HP: 0025033	Abnormality of digestive system morphology	0/20
HP: 0025423	Abnormal larynx morphology	0/20
HP: 0025439	Pharyngitis	0/20
HP: 0030812	Enlarged tonsils	0/20
HP: 0032043	Odynophagia	0/20
HP: 0032101	Unusual infection	0/20
HP: 0100763	Abnormality of the lymphatic system	0/20
HP: 0100765	Abnormality of the tonsils	0/20
HP: 0100776	Recurrent pharyngitis	0/20

Name

Top Correlation

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000152

Abnormality of head or neck

0/20

HP: 0000234

Abnormality of the head

0/20

HP: 0000271