J38.7

Case	Control
641	459564

Case

Control

641

459564

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr16:54497330	rs72815254	-	A>G	96	40622	30.48	3.377e-08	1.782
chr6:83042752	rs9449458	-	G>A	100	44481	26.13	3.19e-07	1.692
chr13:30486314	rs11616471	-	G>A	120	56044	25.87	3.648e-07	1.62
chr6:83089186	rs74886029	-	G>C	132	63220	25.54	4.343e-07	1.584
chr19:20957571	rs11881061	-	G>T	140	148569	23.99	9.704e-07	0.6476
chr1:65780763	rs78509280	DNAJC6	T>C	36	12084	23.02	1.601e-06	2.206
chr13:79368944	rs76232677	-	G>A	72	30412	22.79	1.809e-06	1.771
chr6:10775600	rs567083	TMEM14B	G>A	52	20020	22.5	2.106e-06	1.934
chr21:23392906	rs111892515	-	C>T	77	33141	22.3	2.337e-06	1.73
chr4:48804094	rs55755048	-	A>G	79	34432	22.29	2.349e-06	1.719
chr6:14016648	rs72833189	-	G>A	46	17100	21.98	2.752e-06	1.995
chr6:82768899	rs117588604	-	G>T	92	41976	21.86	2.936e-06	1.65
chr6:114651696	rs117911683	HS3ST5	G>A	32	10471	21.56	3.436e-06	2.248
chr21:20829922	rs10084606	-	G>A	183	97009	21.41	3.707e-06	1.443
chr1:213130212	rs75157556	VASH2	T>C	51	19866	21.37	3.795e-06	1.915
chr16:54489240	rs72815244	-	A>C	88	39858	21.28	3.966e-06	1.655
chr1:111018176	rs78533921	-	G>A	31	10290	20.4	6.284e-06	2.227
chr16:54450306	rs79482565	-	G>C	109	52328	20.31	6.602e-06	1.564
chr4:157565511	rs4690873	-	T>C	39	14139	20.12	7.287e-06	2.043
chr8:27308961	rs2278319	PTK2B	C>T	399	239907	20.05	7.534e-06	1.306

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0002779	Tracheomalacia	6/20
HP: 0012118	Laryngeal carcinoma	3/20
HP: 0100605	Neoplasm of the larynx	3/20

Name

Top Correlation

6/20

3/20

Neoplasm of the larynx

3/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0001600	Abnormality of the larynx	0/20
HP: 0001939	Abnormality of metabolism/homeostasis	0/20
HP: 0002011	Morphological central nervous system abnormality	0/20
HP: 0002060	Abnormal cerebral morphology	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002087	Abnormality of the upper respiratory tract	0/20
HP: 0002301	Hemiplegia	0/20
HP: 0002493	Upper motor neuron dysfunction	0/20
HP: 0002538	Abnormality of the cerebral cortex	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002778	Abnormal trachea morphology	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0002860	Squamous cell carcinoma	0/20
HP: 0004374	Hemiplegia/hemiparesis	0/20
HP: 0005607	Abnormal tracheobronchial morphology	0/20
HP: 0008069	Neoplasm of the skin	0/20
HP: 0010307	Stridor	0/20
HP: 0010549	Weakness due to upper motor neuron dysfunction	0/20
HP: 0011017	Abnormal cellular physiology	0/20
HP: 0011442	Abnormal central motor function	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0012252	Abnormal respiratory system morphology	0/20
HP: 0012443	Abnormality of brain morphology	0/20
HP: 0012638	Abnormal nervous system physiology	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012735	Cough	0/20
HP: 0025354	Abnormal cellular phenotype	0/20
HP: 0030829	Abnormal breath sound	0/20
HP: 0031246	Nonproductive cough	0/20
HP: 0100547	Abnormality of forebrain morphology	0/20
HP: 0100606	Neoplasm of the respiratory system	0/20

Name

Top Correlation

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000707

Abnormality of the nervous system

0/20

HP: 0000951

Abnormality of the skin

0/20

HP: 0001574