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ICD-10
HPO
Compare GWAS
Super Class
Other chronic obstructive pulmonary disease
Sub Class
Other specified chronic obstructive pulmonary disease
J44.8
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
950
459255
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr6:421281
rs62389423
-
G>A
426
163615
30.47
3.39e-08
1.351
chr11:69201113
rs11263638
-
G>A
167
55699
26.75
2.316e-07
1.516
chr2:179296971
rs150679361
PRKRA
G>A
46
10850
26.33
2.875e-07
2.116
chr12:121755561
rs2942067
ANAPC5
A>G
154
111174
26.33
2.885e-07
0.6521
chr12:121768248
rs2280067
ANAPC5
T>C
157
112910
26.31
2.907e-07
0.6546
chr19:32571303
rs116897081
-
C>T
57
14403
26.05
3.333e-07
1.963
chr17:72481744
rs73354306
-
A>G
43
44207
25.76
3.857e-07
0.4657
chr2:240321793
rs72993798
HDAC4
C>T
66
17580
25.53
4.364e-07
1.866
chr12:121789560
rs1622534
ANAPC5
A>C
270
173257
24.15
8.934e-07
0.7257
chr5:91116477
rs116069270
-
G>A
66
17945
24.0
9.617e-07
1.832
chr6:396321
rs12203592
IRF4
C>T
497
200714
23.75
1.096e-06
1.288
chr15:63140295
rs76620968
-
G>T
56
14550
23.66
1.148e-06
1.914
chr5:121359965
rs115467216
SRFBP1
C>G
46
11228
23.5
1.249e-06
2.033
chr12:121794068
rs7398701
ANAPC5
C>T
253
163073
23.39
1.321e-06
0.722
chr22:42876982
rs73173047
-
G>T
321
122632
22.97
1.642e-06
1.339
chr15:34256726
rs637055
AVEN
A>C
40
39999
22.03
2.687e-06
0.4802
chr17:29350769
rs8073072
-
T>G
19
25687
21.89
2.889e-06
0.3561
chr12:4351287
rs4384444
-
C>A
422
253506
21.88
2.9e-06
0.7736
chr11:24152390
rs117385004
-
T>C
96
29571
21.74
3.118e-06
1.622
chr11:40346092
rs74956389
LRRC4C
G>A
64
17862
21.4
3.728e-06
1.787
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
1/20
HP: 0000152
Abnormality of head or neck
2/20
HP: 0000153
Abnormality of the mouth
2/20
HP: 0000163
Abnormal oral cavity morphology
2/20
HP: 0000205
Pursed lips
1/20
HP: 0000234
Abnormality of the head
2/20
HP: 0000271
Abnormality of the face
2/20
HP: 0002086
Abnormality of the respiratory system
2/20
HP: 0002088
Abnormal lung morphology
2/20
HP: 0002097
Emphysema
1/20
HP: 0011338
Abnormality of mouth shape
2/20
HP: 0011947
Respiratory tract infection
2/20
HP: 0012252
Abnormal respiratory system morphology
2/20
HP: 0012387
Bronchitis
1/20
HP: 0025031
Abnormality of the digestive system
2/20
HP: 0025033
Abnormality of digestive system morphology
2/20
HP: 0031816
Abnormal oral morphology
2/20
HP: 0032342
Reduced forced expiratory volume in one second
4/20
ID
Name
Top Correlation
HP: 0002795
Functional respiratory abnormality
0/20
HP: 0004469
Chronic bronchitis
0/20
HP: 0006510
Chronic obstructive pulmonary disease
0/20
HP: 0006536
Obstructive lung disease
0/20
HP: 0030878
Abnormality on pulmonary function testing
0/20
HP: 0032340
Abnormal spirometry test
0/20