Other disorders of lung

J98.4

Female Case	Female Control	% Female
637	249226	47%

Male Case	Male Control	% Male
708	209634	53%

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:105005500	rs117809245	-	T>C	44	8032	27.86	1.305e-07	2.205
chr2:238190988	rs187336543	-	A>G	85	19996	23.78	1.079e-06	1.718
chr12:127854167	rs117636484	-	G>C	47	9503	21.99	2.738e-06	1.983
chr14:33915360	rs117691598	NPAS3	A>G	69	15773	21.36	3.798e-06	1.76
chr4:161270328	rs12507426	-	C>T	439	143109	21.3	3.933e-06	1.308
chr16:25776098	rs76569071	HS3ST4	C>G	69	15991	20.24	6.821e-06	1.734
chr18:73093961	rs17280207	-	C>T	274	84142	20.1	7.347e-06	1.354
chr2:215252810	rs76286512	SPAG16	T>G	47	9773	20.08	7.431e-06	1.926
chr2:12839250	rs62124754	-	A>G	187	54163	19.82	8.504e-06	1.419
chr14:33899112	rs117313189	NPAS3	C>T	60	13493	19.79	8.628e-06	1.787
chr14:78904267	rs1861081	NRXN3	A>G	227	67900	19.57	9.717e-06	1.379
chr16:25745643	rs145054662	HS3ST4	G>A	61	13826	19.56	9.733e-06	1.774
chr11:130262526	rs10791075	-	A>C	305	148309	19.37	1.074e-05	0.7512
chr10:83596463	rs17713345	-	C>T	77	18692	19.15	1.208e-05	1.664
chr15:79618832	rs79266562	TMED3	T>C	36	6968	19.12	1.229e-05	2.064
chr10:61535106	rs7908456	-	T>G	272	84229	18.64	1.58e-05	1.34
chr1:232784258	rs6424245	-	A>C	655	226663	18.5	1.703e-05	1.267
chr5:168299318	rs2974436	SLIT3	T>C	21	20010	18.38	1.807e-05	0.4019
chr14:41504114	rs4341675	-	T>C	103	60257	18.34	1.843e-05	0.6465
chr8:127236278	rs62521446	-	C>T	39	7863	18.28	1.905e-05	1.98

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr10:62209646	rs75224225	ANK3	T>C	57	7732	38.34	5.941e-10	2.263
chr10:62304474	rs80214098	ANK3	C>T	49	7029	28.15	1.123e-07	2.128
chr14:31960514	rs72674803	NUBPL	C>A	74	12281	27.66	1.448e-07	1.857
chr18:55828023	rs117704686	NEDD4L	G>T	74	12479	25.94	3.516e-07	1.822
chr3:69992942	rs115256217	MITF	T>G	46	6796	24.46	7.577e-07	2.069
chr4:182010023	rs13136600	-	G>A	73	12502	24.1	9.156e-07	1.791
chr2:216139605	rs115967880	-	G>A	45	6684	23.45	1.283e-06	2.054
chr14:57450468	rs1015547	-	T>C	385	140648	22.44	2.167e-06	0.7557
chr9:11315721	rs72696282	-	G>A	104	20011	22.13	2.546e-06	1.608
chr17:50850854	rs145079521	-	A>C	89	16512	21.48	3.573e-06	1.653
chr8:85340669	rs317941	RALYL	C>T	130	26420	21.16	4.236e-06	1.522
chr9:27228503	rs1014049	TEK	C>T	496	174828	20.96	4.681e-06	0.7774
chr19:2215937	rs117338514	DOT1L	C>T	37	5316	20.95	4.707e-06	2.111
chr9:11814454	rs62552264	-	A>G	109	21432	20.79	5.12e-06	1.57
chr17:51116852	rs77950701	-	G>T	86	15970	20.77	5.178e-06	1.653
chr11:122199819	rs12805433	-	G>C	154	32596	20.76	5.218e-06	1.472
chr17:77759691	rs11653768	CBX2	A>G	205	45377	20.69	5.388e-06	1.41
chr13:111415731	rs111728158	-	A>G	41	6215	20.42	6.223e-06	2.023
chr9:11323311	rs186584575	-	G>C	105	20556	20.32	6.538e-06	1.574
chr9:1472056	rs7853203	-	C>A	132	27121	20.26	6.757e-06	1.505

ID	Name	Top Correlation
HP: 0004971	Pulmonary artery hypoplasia	19/20
HP: 0005952	Decreased pulmonary function	16/20
HP: 0005954	Pulmonary capillary hemangiomatosis	20/20
HP: 0007461	Hemangiomatosis	13/20
HP: 0011946	Bronchiolitis obliterans	5/20
HP: 0025508	Gottron's papules	7/20
HP: 0100528	Pleuropulmonary blastoma	19/20
HP: 0100552	Neoplasm of the tracheobronchial system	1/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001028	Hemangioma	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002087	Abnormality of the upper respiratory tract	0/20
HP: 0002088	Abnormal lung morphology	0/20
HP: 0002103	Abnormality of the pleura	0/20
HP: 0002206	Pulmonary fibrosis	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0004414	Abnormality of the pulmonary artery	0/20
HP: 0004930	Abnormality of the pulmonary vasculature	0/20
HP: 0005306	Capillary hemangioma	0/20
HP: 0005607	Abnormal tracheobronchial morphology	0/20
HP: 0006530	Interstitial pulmonary abnormality	0/20
HP: 0011121	Abnormality of skin morphology	0/20
HP: 0011355	Localized skin lesion	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0011945	Bronchiolitis obliterans organizing pneumonia	0/20
HP: 0012252	Abnormal respiratory system morphology	0/20
HP: 0025015	Abnormal vascular morphology	0/20
HP: 0030680	Abnormality of cardiovascular system morphology	0/20
HP: 0030962	Abnormal morphology of the great vessels	0/20
HP: 0030966	Abnormal pulmonary artery morphology	0/20
HP: 0100526	Neoplasm of the lung	0/20
HP: 0100527	Neoplasia of the pleura	0/20
HP: 0100606	Neoplasm of the respiratory system	0/20
HP: 0100742	Vascular neoplasm	0/20
HP: 0200034	Papule	0/20