Case | Control |
---|---|
1304 | 458901 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
---|---|---|---|---|---|---|---|---|
chr16:58713894 | rs7193572 | SLC38A7 | A>G | 66 | 9955 | 47.82 | 4.676e-12 | 2.315 |
chr10:114925758 | rs1056877 | TCF7L2 | T>C | 76 | 12375 | 45.26 | 1.727e-11 | 2.151 |
chr9:9924724 | rs7849581 | PTPRD | C>T | 122 | 24023 | 39.93 | 2.629e-10 | 1.783 |
chr4:188081872 | rs6815262 | - | C>A | 83 | 14538 | 39.79 | 2.824e-10 | 1.996 |
chr10:65924376 | rs4390238 | - | G>T | 71 | 11804 | 39.75 | 2.884e-10 | 2.102 |
chr13:31074486 | rs7326905 | HMGB1 | G>A | 65 | 10544 | 38.9 | 4.471e-10 | 2.151 |
chr3:24599023 | rs9826216 | - | T>G | 465 | 121619 | 37.87 | 7.559e-10 | 1.368 |
chr9:129984107 | rs3739553 | RALGPS1 | G>A | 85 | 15328 | 37.26 | 1.035e-09 | 1.939 |
chr4:175428308 | rs2612657 | HPGD | T>C | 66 | 10982 | 36.81 | 1.3e-09 | 2.098 |
chr9:129979758 | rs3780318 | RALGPS1 | G>A | 88 | 16153 | 36.56 | 1.482e-09 | 1.907 |
chr2:121076629 | rs57043265 | - | A>G | 94 | 17719 | 36.5 | 1.523e-09 | 1.869 |
chr14:105953324 | rs7160340 | CRIP1 | T>C | 148 | 31692 | 35.59 | 2.43e-09 | 1.649 |
chr17:21433779 | rs7207358 | - | T>C | 79 | 14218 | 34.97 | 3.345e-09 | 1.943 |
chr12:8138155 | rs10846278 | - | A>G | 189 | 42903 | 34.84 | 3.58e-09 | 1.556 |
chr17:29290106 | rs55861543 | - | C>T | 105 | 20654 | 34.78 | 3.692e-09 | 1.786 |
chr10:49805216 | rs11101394 | ARHGAP22 | C>T | 95 | 18262 | 33.5 | 7.129e-09 | 1.817 |
chr1:54614145 | rs6696001 | AL357673.1 | C>T | 155 | 34023 | 33.09 | 8.812e-09 | 1.603 |
chr3:5971348 | rs75007537 | - | G>A | 76 | 13891 | 32.17 | 1.41e-08 | 1.915 |
chr4:48088446 | rs6858664 | TXK | G>A | 59 | 9915 | 31.86 | 1.658e-08 | 2.072 |
chr9:3290538 | rs2991291 | RFX3 | T>G | 107 | 21649 | 31.69 | 1.81e-08 | 1.732 |
ID | Name | Top Correlation |
---|---|---|
HP: 0000164 | Abnormality of the dentition | 2/20 |
HP: 0000670 | Carious teeth | 2/20 |
HP: 0006482 | Abnormality of dental morphology | 3/20 |
HP: 0011061 | Abnormality of dental structure | 3/20 |