L03.2

Case	Control
445	459760

Case

Control

445

459760

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr12:76585816	rs118157625	-	A>G	49	23864	29.84	4.697e-08	2.186
chr9:108681025	rs77036860	-	G>T	29	12316	24.81	6.323e-07	2.482
chr3:28141773	rs114659023	-	C>T	37	17467	24.5	7.446e-07	2.245
chr6:6605541	rs79972858	LY86	G>A	26	10691	23.91	1.01e-06	2.557
chr5:44724634	rs115953456	-	A>G	34	15729	23.5	1.248e-06	2.28
chr13:104713852	rs78653070	-	A>G	51	27586	23.31	1.381e-06	1.979
chr17:6676146	rs6502977	XAF1	C>A	40	20145	21.72	3.155e-06	2.09
chr19:8044223	rs62123121	ELAVL1	G>A	42	21754	21.29	3.941e-06	2.042
chr3:65401757	rs76234656	MAGI1	C>T	34	16479	21.06	4.456e-06	2.187
chr4:156685541	rs1380504	GUCY1B1	A>G	110	169259	21.06	4.462e-06	0.6302
chr6:10460693	rs9348515	-	T>C	345	292149	20.92	4.796e-06	1.362
chr17:50473379	rs72837735	-	G>T	85	138524	20.79	5.13e-06	0.5987
chr7:111300950	rs78368656	-	A>G	32	15181	20.71	5.35e-06	2.221
chr12:61952679	rs112528716	-	G>A	76	47586	20.67	5.449e-06	1.712
chr22:23558688	rs117582309	BCR	A>C	28	12654	20.48	6.041e-06	2.325
chr2:10620090	rs56184404	-	C>G	121	84548	20.45	6.112e-06	1.548
chr5:106879930	rs75574456	EFNA5	T>A	58	33769	20.39	6.32e-06	1.828
chr1:10796866	rs880315	CASZ1	T>C	360	312317	20.34	6.498e-06	1.364
chr20:1300205	rs41280302	SDCBP2	C>T	47	25696	20.28	6.701e-06	1.939
chr6:10459068	rs7759878	-	C>T	401	348334	20.25	6.781e-06	1.345

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000010	Recurrent urinary tract infections	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000245	Abnormality of the paranasal sinuses	0/20
HP: 0000246	Sinusitis	0/20
HP: 0000271	Abnormality of the face	0/20
HP: 0000600	Abnormality of the pharynx	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0000929	Abnormal skull morphology	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002733	Abnormality of the lymph nodes	0/20
HP: 0002840	Lymphadenitis	0/20
HP: 0003549	Abnormality of connective tissue	0/20
HP: 0009121	Abnormal axial skeleton morphology	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011110	Tonsillitis	0/20
HP: 0011277	Abnormality of the urinary system physiology	0/20
HP: 0011821	Abnormality of facial skeleton	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025439	Pharyngitis	0/20
HP: 0032101	Unusual infection	0/20
HP: 0100658	Cellulitis	0/20
HP: 0100763	Abnormality of the lymphatic system	0/20
HP: 0100765	Abnormality of the tonsils	0/20

Name

Top Correlation

0/20

0/20

0/20