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ICD-10
HPO
Compare GWAS
Super Class
Other local infections of skin and subcutaneous tissue
Sub Class
Local infection of skin and subcutaneous tissue, unspecified
L08.9
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
1495
458710
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr5:63108045
rs165495
-
G>A
63
10091
28.1
1.151e-07
1.943
chr17:11395495
rs118191723
SHISA6
G>A
77
13311
26.63
2.463e-07
1.802
chr12:92749668
rs75501970
-
C>T
261
59500
25.21
5.135e-07
1.382
chr5:114306194
rs115337854
-
C>A
92
17022
24.71
6.674e-07
1.684
chr11:22463521
rs75866686
-
T>C
113
22654
21.69
3.208e-06
1.558
chr3:185741097
rs78267075
-
A>G
205
46586
20.31
6.584e-06
1.385
chr6:148466752
rs2328858
-
G>C
118
23884
20.12
7.275e-06
1.521
chr12:45734019
rs73093306
ANO6
C>T
275
65314
20.09
7.371e-06
1.327
chr1:7283786
rs116808675
CAMTA1
A>G
52
29308
19.95
7.929e-06
0.5404
chr19:20089412
rs6511063
-
G>A
615
161346
19.2
1.179e-05
1.218
chr3:29782808
rs79189016
AC098650.1
A>G
227
52801
19.15
1.206e-05
1.351
chr12:99233282
rs201401
ANKS1B
T>C
1416
399941
19.04
1.282e-05
1.169
chr18:75721166
rs34750877
-
G>A
188
42500
18.91
1.37e-05
1.386
chr16:57670667
rs4522409
ADGRG1
A>G
122
25666
18.77
1.475e-05
1.489
chr20:54971386
rs6064391
CSTF1
G>T
1423
477072
18.76
1.486e-05
0.856
chr7:44319537
rs79601140
CAMK2B
C>T
87
16968
18.72
1.516e-05
1.596
chr20:31790377
rs17396317
-
G>A
494
127194
18.4
1.788e-05
1.234
chr4:55956836
rs7671745
KDR
G>A
1209
337805
18.16
2.026e-05
1.169
chr11:3856743
rs117640293
RHOG
C>T
63
11428
18.16
2.028e-05
1.712
chr2:240155662
rs3791623
HDAC4
C>A
368
91782
18.1
2.095e-05
1.266
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0002726
Recurrent Staphylococcus aureus infections
8/20
HP: 0005406
Recurrent bacterial skin infections
3/20
HP: 0007499
Recurrent staphylococcal infections
3/20
HP: 0011132
Chronic furunculosis
4/20
HP: 0030813
Absent tonsils
2/20
HP: 0032158
Unusual infection by anatomical site
1/20
HP: 0032162
Unusual skin infection
1/20
HP: 0032163
Molluscum contagiosum
2/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000152
Abnormality of head or neck
0/20
HP: 0000234
Abnormality of the head
0/20
HP: 0000271
Abnormality of the face
0/20
HP: 0000282
Facial edema
0/20
HP: 0000598
Abnormality of the ear
0/20
HP: 0000600
Abnormality of the pharynx
0/20
HP: 0000606
Abnormality of the periorbital region
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0000951
Abnormality of the skin
0/20
HP: 0000964
Eczema
0/20
HP: 0000969
Edema
0/20
HP: 0001051
Seborrheic dermatitis
0/20
HP: 0001055
Erysipelas
0/20
HP: 0001574
Abnormality of the integument
0/20
HP: 0001581
Recurrent skin infections
0/20
HP: 0001626
Abnormality of the cardiovascular system
0/20
HP: 0001939
Abnormality of metabolism/homeostasis
0/20
HP: 0001999
Abnormal facial shape
0/20
HP: 0002086
Abnormality of the respiratory system
0/20
HP: 0002597
Abnormality of the vasculature
0/20
HP: 0002664
Neoplasm
0/20
HP: 0002715
Abnormality of the immune system
0/20
HP: 0002718
Recurrent bacterial infections
0/20
HP: 0002719
Recurrent infections
0/20
HP: 0002795
Functional respiratory abnormality
0/20
HP: 0003549
Abnormality of connective tissue
0/20
HP: 0008069
Neoplasm of the skin
0/20
HP: 0009720
Adenoma sebaceum
0/20
HP: 0010614
Fibroma
0/20
HP: 0010615
Angiofibromas
0/20
HP: 0010622
Neoplasm of the skeletal system
0/20
HP: 0010978
Abnormality of immune system physiology
0/20
HP: 0011032
Abnormality of fluid regulation
0/20
HP: 0011121
Abnormality of skin morphology
0/20
HP: 0011122
Abnormality of skin physiology
0/20
HP: 0011123
Inflammatory abnormality of the skin
0/20
HP: 0011355
Localized skin lesion
0/20
HP: 0011792
Neoplasm by histology
0/20
HP: 0011793
Neoplasm by anatomical site
0/20
HP: 0011799
Abnormality of facial soft tissue
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0012316
Fibrous tissue neoplasm
0/20
HP: 0012337
Abnormal homeostasis
0/20
HP: 0012531
Pain
0/20
HP: 0012647
Abnormal inflammatory response
0/20
HP: 0012649
Increased inflammatory response
0/20
HP: 0025027
Osteoma cutis
0/20
HP: 0025031
Abnormality of the digestive system
0/20
HP: 0025084
Folliculitis
0/20
HP: 0025142
Constitutional symptom
0/20
HP: 0030448
Soft tissue sarcoma
0/20
HP: 0030766
Ear pain
0/20
HP: 0031416
Abnormal nasal mucus secretion
0/20
HP: 0031417
Rhinorrhea
0/20
HP: 0031704
Abnormal ear physiology
0/20
HP: 0032101
Unusual infection
0/20
HP: 0100242
Sarcoma
0/20
HP: 0100246
Osteoma
0/20
HP: 0100539
Periorbital edema
0/20
HP: 0100658
Cellulitis
0/20
HP: 0100763
Abnormality of the lymphatic system
0/20
HP: 0100765
Abnormality of the tonsils
0/20
HP: 0200036
Skin nodule
0/20