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ICD-10
HPO
Compare GWAS
Super Class
Other acquired deformities of limbs
Sub Class
Flat foot [pes planus] (acquired)
M21.4
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
274
459931
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr1:5030204
rs10915301
-
G>A
23
11230
39.28
3.67e-10
3.495
chr5:91874315
rs34324272
-
G>A
31
19179
33.13
8.618e-09
2.771
chr15:101715520
rs4965803
-
T>G
31
19401
32.62
1.121e-08
2.749
chr12:56755058
rs4301822
APOF
A>G
23
12589
31.34
2.163e-08
3.098
chr22:23753237
rs11913492
-
T>C
22
11836
31.29
2.223e-08
3.164
chr3:16473541
rs55798912
RFTN1
G>A
37
25673
31.1
2.45e-08
2.498
chr3:168804217
rs9809633
MECOM
T>C
44
33073
30.47
3.385e-08
2.319
chr2:226875241
rs73088581
-
C>A
31
20205
29.7
5.051e-08
2.633
chr18:75996545
rs9961918
-
T>C
35
24082
29.28
6.27e-08
2.489
chr6:136505700
rs6570070
PDE7B
G>C
20
10618
29.09
6.921e-08
3.195
chr7:74489889
rs10280764
RCC1L
C>T
25
14860
28.91
7.578e-08
2.86
chr12:56722060
rs1918496
PAN2
G>T
21
11596
28.28
1.051e-07
3.074
chr1:247938748
rs6587481
-
C>T
23
13328
28.02
1.201e-07
2.928
chr16:30007325
rs56183743
HIRIP3
C>T
74
68745
27.46
1.608e-07
1.898
chr3:168794655
rs16853115
-
T>A
37
26724
27.45
1.609e-07
2.371
chr22:27953924
rs116950499
-
G>A
22
12631
27.39
1.661e-07
2.958
chr3:168805267
rs6777161
MECOM
C>G
43
33166
27.1
1.932e-07
2.233
chr7:130445640
rs73472977
-
A>G
27
17145
27.09
1.939e-07
2.68
chr22:44869030
rs8136951
-
A>G
27
17252
27.01
2.025e-07
2.677
chr3:181251296
rs1842151
-
G>A
52
43384
26.3
2.924e-07
2.073
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0001073
Cigarette-paper scars
4/20
HP: 0001761
Pes cavus
2/20
HP: 0001771
Achilles tendon contracture
4/20
HP: 0001840
Metatarsus adductus
2/20
HP: 0001848
Calcaneovalgus deformity
4/20
HP: 0001884
Talipes calcaneovalgus
11/20
HP: 0004288
Pseudoepiphyses of hand bones
19/20
HP: 0004684
Talipes valgus
20/20
HP: 0005109
Abnormality of the Achilles tendon
2/20
HP: 0005850
Congenital talipes calcaneovalgus
12/20
HP: 0005913
Abnormality of metacarpal epiphyses
19/20
HP: 0005924
Abnormality of the epiphyses of the hand
18/20
HP: 0008119
Deformed tarsal bones
4/20
HP: 0008364
Abnormality of the calcaneus
4/20
HP: 0009124
Abnormal adipose tissue morphology
2/20
HP: 0009193
Pseudoepiphyses of the metacarpals
19/20
HP: 0010584
Pseudoepiphyses
19/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0000951
Abnormality of the skin
0/20
HP: 0000987
Atypical scarring of skin
0/20
HP: 0001001
Abnormality of subcutaneous fat tissue
0/20
HP: 0001075
Atrophic scars
0/20
HP: 0001155
Abnormality of the hand
0/20
HP: 0001163
Abnormality of the metacarpal bones
0/20
HP: 0001367
Abnormal joint morphology
0/20
HP: 0001371
Flexion contracture
0/20
HP: 0001437
Abnormality of the musculature of the lower limbs
0/20
HP: 0001574
Abnormality of the integument
0/20
HP: 0001760
Abnormality of the foot
0/20
HP: 0001763
Pes planus
0/20
HP: 0001832
Abnormal metatarsal morphology
0/20
HP: 0001850
Abnormality of the tarsal bones
0/20
HP: 0001883
Talipes
0/20
HP: 0002813
Abnormality of limb bone morphology
0/20
HP: 0002814
Abnormality of the lower limb
0/20
HP: 0002817
Abnormality of the upper limb
0/20
HP: 0003011
Abnormality of the musculature
0/20
HP: 0003028
Abnormality of the ankles
0/20
HP: 0003121
Limb joint contracture
0/20
HP: 0003549
Abnormality of connective tissue
0/20
HP: 0003717
Minimal subcutaneous fat
0/20
HP: 0003758
Reduced subcutaneous adipose tissue
0/20
HP: 0003839
Abnormality of upper limb epiphysis morphology
0/20
HP: 0004334
Dermal atrophy
0/20
HP: 0005656
Positional foot deformity
0/20
HP: 0005750
Contractures of the joints of the lower limbs
0/20
HP: 0005930
Abnormality of epiphysis morphology
0/20
HP: 0006505
Abnormality of limb epiphysis morphology
0/20
HP: 0008065
Aplasia/Hypoplasia of the skin
0/20
HP: 0008366
Contractures involving the joints of the feet
0/20
HP: 0009127
Abnormality of the musculature of the limbs
0/20
HP: 0011121
Abnormality of skin morphology
0/20
HP: 0011314
Abnormality of long bone morphology
0/20
HP: 0011354
Generalized abnormality of skin
0/20
HP: 0011355
Localized skin lesion
0/20
HP: 0011729
Abnormality of joint mobility
0/20
HP: 0011805
Abnormal skeletal muscle morphology
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0011843
Abnormality of skeletal physiology
0/20
HP: 0011844
Abnormal appendicular skeleton morphology
0/20
HP: 0040063
Decreased adipose tissue
0/20
HP: 0040064
Abnormality of limbs
0/20
HP: 0040068
Abnormality of limb bone
0/20
HP: 0040069
Abnormal lower limb bone morphology
0/20
HP: 0040070
Abnormal upper limb bone morphology
0/20
HP: 0100261
Abnormal tendon morphology
0/20
HP: 0100491
Abnormality of lower limb joint
0/20
HP: 0100699
Scarring
0/20