M23.9

Case	Control
237	459968

Case

Control

237

459968

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr4:138160651	rs114975256	-	C>G	27	19514	28.09	1.16e-07	2.734
chr5:149901972	rs74645913	NDST1	G>A	18	11319	25.09	5.474e-07	3.128
chr13:87759869	rs118142624	-	T>C	27	20722	24.79	6.403e-07	2.584
chr20:49611586	rs11904901	-	C>T	260	394786	24.66	6.846e-07	1.55
chr10:36487178	rs116889598	-	T>C	30	24276	24.19	8.751e-07	2.449
chr9:27524731	rs700785	MOB3B	G>A	18	11661	23.36	1.346e-06	3.016
chr3:150384657	rs114572143	ERICH6	G>A	27	21405	22.95	1.661e-06	2.499
chr22:33576898	rs68035672	LARGE1	A>C	120	154985	22.56	2.041e-06	1.635
chr5:160337367	rs78531022	-	T>C	24	18342	21.99	2.742e-06	2.574
chr2:167906591	rs116277684	XIRP2	C>A	29	24097	21.88	2.9e-06	2.381
chr6:116543847	rs1204798	NT5DC1	A>G	180	257394	21.74	3.127e-06	1.537
chr20:49630618	rs6091248	KCNG1	G>A	272	423330	21.5	3.542e-06	1.508
chr7:56734410	rs11773101	-	C>T	19	13232	21.16	4.225e-06	2.801
chr1:6233573	rs11121407	CHD5	A>C	87	104858	20.91	4.811e-06	1.703
chr3:134954743	rs1501214	EPHB1	G>A	53	177512	20.91	4.825e-06	0.521
chr11:112922506	rs7950359	NCAM1	G>A	164	411140	20.75	5.246e-06	0.6511
chr3:167575015	rs114269520	-	C>G	24	19055	20.59	5.685e-06	2.503
chr6:42662975	rs55996132	-	C>T	22	16692	20.52	5.904e-06	2.59
chr14:98804267	rs117503370	-	G>A	27	22355	20.24	6.82e-06	2.371
chr6:9597901	rs12202796	-	G>A	23	17890	20.2	6.971e-06	2.525

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000010	Recurrent urinary tract infections	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0001367	Abnormal joint morphology	0/20
HP: 0001369	Arthritis	0/20
HP: 0001392	Abnormality of the liver	0/20
HP: 0001871	Abnormality of blood and blood-forming tissues	0/20
HP: 0001977	Abnormal thrombosis	0/20
HP: 0001997	Gout	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002813	Abnormality of limb bone morphology	0/20
HP: 0002814	Abnormality of the lower limb	0/20
HP: 0002815	Abnormality of the knee	0/20
HP: 0002823	Abnormality of femur morphology	0/20
HP: 0004418	Thrombophlebitis	0/20
HP: 0004936	Venous thrombosis	0/20
HP: 0006562	Viral hepatitis	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011277	Abnormality of the urinary system physiology	0/20
HP: 0011314	Abnormality of long bone morphology	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0011844	Abnormal appendicular skeleton morphology	0/20
HP: 0012115	Hepatitis	0/20
HP: 0012531	Pain	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025033	Abnormality of digestive system morphology	0/20
HP: 0025142	Constitutional symptom	0/20
HP: 0030839	Knee pain	0/20
HP: 0031071	Abnormal endocrine morphology	0/20
HP: 0031846	Femur fracture	0/20
HP: 0032072	Popliteal synovial cyst	0/20
HP: 0032101	Unusual infection	0/20
HP: 0040064	Abnormality of limbs	0/20
HP: 0040068	Abnormality of limb bone	0/20
HP: 0040069	Abnormal lower limb bone morphology	0/20
HP: 0100491	Abnormality of lower limb joint	0/20
HP: 0410042	Abnormal liver morphology	0/20

Name

Top Correlation

HP: 0000010

Recurrent urinary tract infections

0/20

HP: 0000079

Abnormality of the urinary system

0/20

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000119