N02.8

Case	Control
170	460035

Case

Control

170

460035

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr6:126475225	rs117102925	TRMT11	T>G	17	12190	33.75	6.262e-09	3.823
chr22:33706945	rs73166244	LARGE1	C>T	21	18759	27.3	1.738e-07	3.052
chr8:27011451	rs7837776	-	C>T	26	27019	24.81	6.334e-07	2.65
chr5:148474831	rs74757407	-	G>A	16	13131	24.68	6.77e-07	3.312
chr20:16106179	rs76462647	-	A>G	33	38405	23.93	9.997e-07	2.375
chr11:103416191	rs117053498	-	G>A	25	25864	23.84	1.045e-06	2.645
chr8:127142943	rs77436226	-	C>A	17	14820	23.11	1.531e-06	3.105
chr2:137147387	rs57767241	-	C>T	17	15083	22.26	2.375e-06	3.046
chr5:122552547	rs12651869	-	G>A	35	42872	22.24	2.408e-06	2.259
chr7:2582907	rs77213198	BRAT1	C>T	13	9841	22.22	2.436e-06	3.486
chr9:100568780	rs10983826	-	C>T	59	85870	22.21	2.45e-06	1.932
chr12:104146156	rs75991028	STAB2	T>C	19	18108	21.68	3.23e-06	2.853
chr2:169587361	rs4668100	CERS6	C>T	22	22451	21.58	3.397e-06	2.669
chr22:33328805	rs77159665	SYN3	G>A	29	33633	21.36	3.803e-06	2.38
chr4:86448538	rs17383402	ARHGAP24	A>G	18	16787	21.29	3.947e-06	2.899
chr8:115247274	rs111611618	-	G>A	23	23689	21.18	4.183e-06	2.597
chr2:233237442	rs114142302	-	G>A	22	22740	21.11	4.345e-06	2.643
chr5:117948334	rs114614458	-	G>A	35	46229	21.02	4.557e-06	2.22
chr9:94166106	rs1663502	-	C>A	32	39157	20.53	5.88e-06	2.26
chr15:31663699	rs76591360	KLF13	C>T	20	20131	20.4	6.273e-06	2.711

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000008	Abnormal morphology of female internal genitalia	0/20
HP: 0000010	Recurrent urinary tract infections	0/20
HP: 0000077	Abnormality of the kidney	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000100	Nephrotic syndrome	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000142	Abnormal vagina morphology	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0001939	Abnormality of metabolism/homeostasis	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0003110	Abnormality of urine homeostasis	0/20
HP: 0010460	Abnormality of the female genitalia	0/20
HP: 0010935	Abnormality of the upper urinary tract	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011277	Abnormality of the urinary system physiology	0/20
HP: 0012211	Abnormal renal physiology	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012461	Bacteriuria	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0030683	Vaginitis	0/20
HP: 0032101	Unusual infection	0/20

Name

Top Correlation

0/20

0/20

0/20