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ICD-10
HPO
Compare GWAS
Super Class
Other diseases of urinary system
Sub Class
Bladder-neck obstruction
Vesicointestinal fistula
Diverticulum of bladder
Other specified disorders of bladder
Bladder disorder, unspecified
Other disorders of bladder
N32
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
11252
448942
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr5:1322087
rs401681
CLPTM1L
C>T
9849
415830
49.47
2.013e-12
0.9105
chr5:1342714
rs31489
CLPTM1L
C>A
9105
385203
45.44
1.572e-11
0.913
chr5:1315660
rs4975616
-
A>G
9511
401316
44.34
2.757e-11
0.9147
chr10:22581581
rs116940348
-
G>A
848
27852
33.56
6.914e-09
1.228
chr5:1320722
rs402710
CLPTM1L
C>T
7776
327711
31.74
1.766e-08
0.9242
chr10:22403894
rs118081660
-
G>C
848
28585
25.14
5.345e-07
1.194
chr8:141755310
rs35426024
PTK2
G>A
10549
437842
24.67
6.796e-07
0.9364
chr21:43146901
rs60307464
-
G>C
3166
116571
24.28
8.335e-07
1.1
chr8:141978460
rs10104187
PTK2
C>T
10405
431689
23.65
1.153e-06
0.9376
chr8:11599570
rs10090884
GATA4
A>C
1758
78614
23.15
1.499e-06
0.8865
chr3:55101126
rs75380338
CACNA2D3
A>G
614
29747
22.72
1.876e-06
0.8215
chr14:70421611
rs28569153
SMOC1
T>C
372
11610
22.58
2.012e-06
1.286
chr8:141938139
rs11781072
PTK2
T>C
10471
433705
22.26
2.377e-06
0.9395
chr14:70470003
rs1459701
SMOC1
A>G
368
11526
21.75
3.109e-06
1.282
chr5:1297488
rs2736108
-
C>T
7576
289715
21.73
3.145e-06
1.068
chr10:122714701
rs17101187
-
T>G
6568
250112
21.15
4.242e-06
1.07
chr10:123025225
rs7915008
-
G>A
6067
230558
20.88
4.894e-06
1.071
chr6:24239654
rs79581445
DCDC2
C>T
369
11621
20.83
5.008e-06
1.275
chr6:32408735
rs3129878
HLA-DRA
A>C
7172
299758
20.44
6.146e-06
0.9374
chr1:111028588
rs10776712
-
G>A
6139
233511
20.37
6.379e-06
1.07
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000011
Neurogenic bladder
6/20
HP: 0000012
Urinary urgency
3/20
HP: 0000015
Bladder diverticulum
6/20
HP: 0000016
Urinary retention
4/20
HP: 0000022
Abnormality of male internal genitalia
2/20
HP: 0000032
Abnormality of male external genitalia
3/20
HP: 0000142
Abnormal vagina morphology
1/20
HP: 0000795
Abnormality of the urethra
1/20
HP: 0000796
Urethral obstruction
2/20
HP: 0002144
Tethered cord
6/20
HP: 0002435
Meningocele
1/20
HP: 0002475
Myelomeningocele
4/20
HP: 0008455
Dysplastic sacrum
5/20
HP: 0008691
Solitary bladder diverticulum
5/20
HP: 0008711
Benign prostatic hyperplasia
1/20
HP: 0008775
Abnormal prostate morphology
2/20
HP: 0010461
Abnormality of the male genitalia
3/20
HP: 0010476
Aplasia/Hypoplasia of the bladder
6/20
HP: 0010477
Aplasia of the bladder
6/20
HP: 0012874
Abnormal male reproductive system physiology
4/20
HP: 0012875
Abnormal ejaculation
5/20
HP: 0012877
Retrograde ejaculation
6/20
HP: 0025480
Lipomyelomeningocele
5/20
HP: 0030943
Vulvodynia
4/20
HP: 0031938
Abnormal conus terminalis morphology
6/20
HP: 0032465
Bladder trabeculation
6/20
HP: 0041047
Bladder outlet obstruction
2/20
HP: 0100823
Genital hernia
1/20
ID
Name
Top Correlation
HP: 0000008
Abnormal morphology of female internal genitalia
0/20
HP: 0000009
Functional abnormality of the bladder
0/20
HP: 0000010
Recurrent urinary tract infections
0/20
HP: 0000014
Abnormality of the bladder
0/20
HP: 0000036
Abnormality of the penis
0/20
HP: 0000069
Abnormality of the ureter
0/20
HP: 0000076
Vesicoureteral reflux
0/20
HP: 0000077
Abnormality of the kidney
0/20
HP: 0000078
Abnormality of the genital system
0/20
HP: 0000079
Abnormality of the urinary system
0/20
HP: 0000080
Abnormality of reproductive system physiology
0/20
HP: 0000086
Ectopic kidney
0/20
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000119
Abnormality of the genitourinary system
0/20
HP: 0000152
Abnormality of head or neck
0/20
HP: 0000234
Abnormality of the head
0/20
HP: 0000271
Abnormality of the face
0/20
HP: 0000707
Abnormality of the nervous system
0/20
HP: 0000790
Hematuria
0/20
HP: 0000811
Abnormal external genitalia
0/20
HP: 0000812
Abnormal internal genitalia
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0000925
Abnormality of the vertebral column
0/20
HP: 0001551
Abnormal umbilicus morphology
0/20
HP: 0001626
Abnormality of the cardiovascular system
0/20
HP: 0001871
Abnormality of blood and blood-forming tissues
0/20
HP: 0001892
Abnormal bleeding
0/20
HP: 0001939
Abnormality of metabolism/homeostasis
0/20
HP: 0001941
Acidosis
0/20
HP: 0001995
Hyperchloremic acidosis
0/20
HP: 0001999
Abnormal facial shape
0/20
HP: 0002011
Morphological central nervous system abnormality
0/20
HP: 0002012
Abnormality of the abdominal organs
0/20
HP: 0002143
Abnormality of the spinal cord
0/20
HP: 0002242
Abnormal intestine morphology
0/20
HP: 0002414
Spina bifida
0/20
HP: 0002715
Abnormality of the immune system
0/20
HP: 0002719
Recurrent infections
0/20
HP: 0003011
Abnormality of the musculature
0/20
HP: 0003110
Abnormality of urine homeostasis
0/20
HP: 0003312
Abnormal form of the vertebral bodies
0/20
HP: 0003330
Abnormal bone structure
0/20
HP: 0003468
Abnormal vertebral morphology
0/20
HP: 0003549
Abnormality of connective tissue
0/20
HP: 0004298
Abnormality of the abdominal wall
0/20
HP: 0004360
Abnormality of acid-base homeostasis
0/20
HP: 0004428
Elfin facies
0/20
HP: 0004736
Crossed fused renal ectopia
0/20
HP: 0004918
Hyperchloremic metabolic acidosis
0/20
HP: 0005107
Abnormal sacrum morphology
0/20
HP: 0008438
Vertebral arch anomaly
0/20
HP: 0008676
Congenital megaureter
0/20
HP: 0009121
Abnormal axial skeleton morphology
0/20
HP: 0010301
Spinal dysraphism
0/20
HP: 0010460
Abnormality of the female genitalia
0/20
HP: 0010475
Cloacal exstrophy
0/20
HP: 0010651
Abnormal meningeal morphology
0/20
HP: 0010866
Abdominal wall defect
0/20
HP: 0010935
Abnormality of the upper urinary tract
0/20
HP: 0010936
Abnormality of the lower urinary tract
0/20
HP: 0010978
Abnormality of immune system physiology
0/20
HP: 0011024
Abnormality of the gastrointestinal tract
0/20
HP: 0011025
Abnormal cardiovascular system physiology
0/20
HP: 0011027
Abnormal fallopian tube morphology
0/20
HP: 0011028
Abnormality of blood circulation
0/20
HP: 0011029
Internal hemorrhage
0/20
HP: 0011036
Abnormality of renal excretion
0/20
HP: 0011037
Decreased urine output
0/20
HP: 0011277
Abnormality of the urinary system physiology
0/20
HP: 0011805
Abnormal skeletal muscle morphology
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0012210
Abnormal renal morphology
0/20
HP: 0012211
Abnormal renal physiology
0/20
HP: 0012243
Abnormal reproductive system morphology
0/20
HP: 0012337
Abnormal homeostasis
0/20
HP: 0012531
Pain
0/20
HP: 0012587
Macroscopic hematuria
0/20
HP: 0012590
Abnormal urine output
0/20
HP: 0012614
Abnormal urine cytology
0/20
HP: 0012619
Multiple bladder diverticula
0/20
HP: 0012620
Cloacal abnormality
0/20
HP: 0012639
Abnormal nervous system morphology
0/20
HP: 0012647
Abnormal inflammatory response
0/20
HP: 0012649
Increased inflammatory response
0/20
HP: 0012718
Morphological abnormality of the gastrointestinal tract
0/20
HP: 0012786
Recurrent cystitis
0/20
HP: 0012885
Fallopian tube duplication
0/20
HP: 0025031
Abnormality of the digestive system
0/20
HP: 0025033
Abnormality of digestive system morphology
0/20
HP: 0025142
Constitutional symptom
0/20
HP: 0025487
Abnormality of bladder morphology
0/20
HP: 0025633
Abnormal ureter morphology
0/20
HP: 0025634
Abnormal ureter physiology
0/20
HP: 0030157
Flank pain
0/20
HP: 0030261
Absent penis
0/20
HP: 0031967
Cloudy urine
0/20
HP: 0032101
Unusual infection
0/20
HP: 0032171
Bladder pain
0/20
HP: 0032527
Inferiorly positioned umbilicus
0/20
HP: 0040242
Muscle hemorrhage
0/20
HP: 0045005
Neural tube defect
0/20
HP: 0100519
Anuria
0/20
HP: 0100520
Oliguria
0/20
HP: 0100542
Abnormal localization of kidney
0/20
HP: 0100548
Exstrophy
0/20
HP: 0100577
Urinary bladder inflammation
0/20
HP: 0100672
Vaginal hernia
0/20
HP: 0100790
Hernia
0/20
HP: 0100819
Intestinal fistula
0/20
HP: 0100821
Urethrocele
0/20
HP: 0410043
Abnormal neural tube morphology
0/20