N41.0

Case	Control
303	459902

Case

Control

303

459902

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr9:88537208	rs79563872	-	C>T	23	12498	26.56	2.556e-07	2.849
chr5:168834100	rs58811140	-	T>C	210	237645	24.03	9.468e-07	1.506
chr1:182827882	rs73063097	DHX9	T>G	19	10034	23.42	1.299e-06	2.932
chr5:87376496	rs75158223	-	C>T	20	10958	22.68	1.917e-06	2.817
chr5:62858042	rs111863166	-	G>A	40	29450	22.2	2.459e-06	2.122
chr7:1690624	rs56140636	-	C>T	58	49105	21.26	4.001e-06	1.868
chr4:112243711	rs76875701	-	G>A	21	12137	21.16	4.228e-06	2.669
chr1:104768887	rs9651170	-	G>T	345	433967	20.99	4.616e-06	1.434
chr11:35872126	rs12273986	-	A>G	18	9870	20.93	4.768e-06	2.849
chr3:190022305	rs116237436	-	G>T	21	12263	20.77	5.184e-06	2.646
chr18:364326	rs200360991	COLEC12	G>A	371	473793	20.74	5.263e-06	1.435
chr3:33164651	rs79761396	CRTAP	G>A	65	57296	20.68	5.425e-06	1.798
chr3:108326689	rs62266419	DZIP3	G>A	194	221512	20.3	6.622e-06	1.47
chr10:19724676	rs78073630	MALRD1	T>C	34	24372	20.17	7.076e-06	2.165
chr16:19799811	rs17734320	IQCK	C>T	81	76691	20.12	7.275e-06	1.695
chr3:33156335	rs9841225	CRTAP	A>G	92	89924	20.01	7.722e-06	1.647
chr18:42953583	rs74787075	SLC14A2	G>T	35	25906	19.37	1.078e-05	2.113
chr7:111359742	rs112903241	-	C>T	44	35110	19.3	1.117e-05	1.962
chr20:49803973	rs10470025	-	A>G	41	32129	19.2	1.178e-05	2.001
chr16:35174749	rs4887588	-	C>T	22	13565	19.19	1.182e-05	2.506

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0025038	Intratesticular abscess	1/20

Name

Top Correlation

1/20

ID	Name	Top Correlation
HP: 0000022	Abnormality of male internal genitalia	0/20
HP: 0000024	Prostatitis	0/20
HP: 0000031	Epididymitis	0/20
HP: 0000032	Abnormality of male external genitalia	0/20
HP: 0000035	Abnormal testis morphology	0/20
HP: 0000077	Abnormality of the kidney	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000123	Nephritis	0/20
HP: 0000811	Abnormal external genitalia	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0001939	Abnormality of metabolism/homeostasis	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0003110	Abnormality of urine homeostasis	0/20
HP: 0008711	Benign prostatic hyperplasia	0/20
HP: 0008775	Abnormal prostate morphology	0/20
HP: 0009714	Abnormality of the epididymis	0/20
HP: 0010461	Abnormality of the male genitalia	0/20
HP: 0010935	Abnormality of the upper urinary tract	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011277	Abnormality of the urinary system physiology	0/20
HP: 0012211	Abnormal renal physiology	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012330	Pyelonephritis	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0025615	Abscess	0/20
HP: 0031967	Cloudy urine	0/20
HP: 0032251	Abnormal immune system morphology	0/20

Name

Top Correlation

0/20

0/20

0/20