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ICD-10
HPO
Compare GWAS
Super Class
Other disorders of prostate
Sub Class
Other specified disorders of prostate
N42.8
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
767
459438
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr5:19617375
rs74330388
CDH18
A>G
44
12310
26.79
2.267e-07
2.166
chr11:21439725
rs78454572
NELL1
C>G
57
18470
22.62
1.969e-06
1.881
chr9:136820216
rs118073576
VAV2
G>A
69
23980
21.89
2.89e-06
1.766
chr2:79665831
rs115598684
CTNNA2
A>G
47
14733
20.95
4.72e-06
1.947
chr4:84480457
rs781810
GPAT3
G>A
21
31903
20.28
6.693e-06
0.3856
chr1:21793378
rs60515836
NBPF3
T>C
312
148278
20.0
7.745e-06
1.325
chr5:19729704
rs12055067
CDH18
T>C
58
19600
19.76
8.778e-06
1.798
chr15:79484083
rs8028654
-
G>T
640
332648
19.7
9.082e-06
1.253
chr19:48715196
rs34632751
CARD8
T>C
71
25466
19.48
1.014e-05
1.699
chr3:96632262
rs115976690
EPHA6
A>G
36
10539
19.29
1.125e-05
2.066
chr14:94936222
rs55683719
SERPINA9
G>T
170
138810
19.26
1.14e-05
0.7018
chr1:115168600
rs7541738
DENND2C
A>T
367
267912
19.17
1.194e-05
0.7714
chr1:21817365
rs75824579
-
A>G
299
141835
19.03
1.286e-05
1.321
chr10:36435549
rs117174187
-
G>A
44
13895
18.84
1.418e-05
1.921
chr2:134333012
rs17816830
-
T>G
446
223111
18.8
1.451e-05
1.272
chr8:64708707
rs17288962
-
C>A
222
100978
18.78
1.466e-05
1.368
chr8:117235096
rs11390075
-
AG>A
332
160379
18.71
1.524e-05
1.304
chr2:200025189
rs17247467
-
C>T
119
48598
18.47
1.727e-05
1.502
chr18:55180897
rs34558506
-
G>A
53
17858
18.27
1.918e-05
1.803
chr20:11177286
rs17225035
-
T>C
157
67825
18.18
2.013e-05
1.428
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000016
Urinary retention
1/20
HP: 0000022
Abnormality of male internal genitalia
1/20
HP: 0000796
Urethral obstruction
1/20
HP: 0008661
Urethral stenosis
1/20
HP: 0008775
Abnormal prostate morphology
1/20
HP: 0012227
Urethral stricture
1/20
HP: 0031217
Hot flashes
11/20
ID
Name
Top Correlation
HP: 0000009
Functional abnormality of the bladder
0/20
HP: 0000011
Neurogenic bladder
0/20
HP: 0000014
Abnormality of the bladder
0/20
HP: 0000032
Abnormality of male external genitalia
0/20
HP: 0000078
Abnormality of the genital system
0/20
HP: 0000079
Abnormality of the urinary system
0/20
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000119
Abnormality of the genitourinary system
0/20
HP: 0000795
Abnormality of the urethra
0/20
HP: 0000811
Abnormal external genitalia
0/20
HP: 0000812
Abnormal internal genitalia
0/20
HP: 0001871
Abnormality of blood and blood-forming tissues
0/20
HP: 0001881
Abnormal leukocyte morphology
0/20
HP: 0001909
Leukemia
0/20
HP: 0002664
Neoplasm
0/20
HP: 0002715
Abnormality of the immune system
0/20
HP: 0004377
Hematological neoplasm
0/20
HP: 0005547
Myeloproliferative disorder
0/20
HP: 0010461
Abnormality of the male genitalia
0/20
HP: 0010936
Abnormality of the lower urinary tract
0/20
HP: 0010987
Abnormal cellular immune system morphology
0/20
HP: 0011277
Abnormality of the urinary system physiology
0/20
HP: 0011793
Neoplasm by anatomical site
0/20
HP: 0012125
Prostate cancer
0/20
HP: 0012243
Abnormal reproductive system morphology
0/20
HP: 0025142
Constitutional symptom
0/20
HP: 0032251
Abnormal immune system morphology
0/20
HP: 0100787
Prostate neoplasm
0/20