N71.9

Case	Control
194	460011

Case

Control

194

460011

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr3:122328753	rs2173764	PARP15	A>G	21	14098	37.15	1.096e-09	3.586
chr6:50386945	rs60112867	-	C>T	23	17245	33.13	8.607e-09	3.215
chr17:21433779	rs7207358	-	T>C	20	14277	31.63	1.867e-08	3.366
chr5:147863034	rs9325101	HTR4	A>G	22	16718	31.2	2.327e-08	3.185
chr11:67136981	rs3781941	RAD9A	C>T	60	70629	30.84	2.798e-08	2.131
chr16:5674561	rs757604	RBFOX1	T>C	18	12290	30.82	2.834e-08	3.506
chr19:17726809	rs10405904	UNC13A	T>G	19	13478	30.51	3.327e-08	3.389
chr11:66938962	Affx-77128032	KDM2A	G>GA	60	71377	30.04	4.238e-08	2.111
chr11:66992232	rs7113390	KDM2A	T>C	63	76530	29.32	6.143e-08	2.064
chr12:44714149	rs75213944	TMEM117	G>A	24	19588	29.23	6.432e-08	2.955
chr7:154868879	rs1440451	HTR5A	C>G	16	10640	28.75	8.219e-08	3.593
chr10:12404298	rs11257738	CAMK1D	G>A	21	16284	28.29	1.044e-07	3.097
chr11:67034266	rs2228418	GRK2	A>C	61	75292	27.12	1.916e-07	2.031
chr11:67164790	Affx-80280349	RAD9A	GT>G	62	78353	26.29	2.945e-07	1.999
chr7:13805005	rs58565562	-	G>A	16	11230	26.04	3.351e-07	3.4
chr17:65616676	rs2642036	PITPNC1	A>G	28	25949	25.94	3.523e-07	2.611
chr17:58966538	rs7224438	BCAS3	T>C	17	12412	25.7	3.979e-07	3.272
chr6:10687746	Affx-27417025	C6orf52	G>T	32	31668	25.46	4.516e-07	2.455
chr2:156626147	rs34960924	-	C>T	39	41861	25.42	4.605e-07	2.281
chr8:9243988	rs17149960	-	C>A	16	11239	25.06	5.544e-07	3.332

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000008	Abnormal morphology of female internal genitalia	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000130	Abnormality of the uterus	0/20
HP: 0000131	Uterine leiomyoma	0/20
HP: 0000137	Abnormality of the ovary	0/20
HP: 0000138	Ovarian cyst	0/20
HP: 0000140	Abnormality of the menstrual cycle	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0000858	Irregular menstruation	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0007379	Neoplasm of the genitourinary tract	0/20
HP: 0008373	Puberty and gonadal disorders	0/20
HP: 0010460	Abnormality of the female genitalia	0/20
HP: 0010784	Uterine neoplasm	0/20
HP: 0010785	Gonadal neoplasm	0/20
HP: 0010787	Genital neoplasm	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0025427	Abnormal bronchus physiology	0/20
HP: 0025428	Bronchospasm	0/20
HP: 0031065	Abnormal ovarian morphology	0/20
HP: 0031105	Abnormal uterus morphology	0/20
HP: 0100607	Dysmenorrhea	0/20
HP: 0100615	Ovarian neoplasm	0/20

Name

Top Correlation

0/20

0/20

0/20