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ICD-10
HPO
Compare GWAS
Super Class
Female genital prolapse
Sub Class
Cystocele
N81.1
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
5964
454241
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr5:33951693
rs16891982
SLC45A2
G>C
647
66414
53.42
2.69e-13
0.7441
chr12:114666099
rs2555009
-
G>A
6048
439237
50.69
1.083e-12
1.137
chr12:114673421
rs1247943
-
A>G
6054
439996
50.43
1.233e-12
1.137
chr5:33958959
rs28777
SLC45A2
A>C
548
56447
45.62
1.434e-11
0.7441
chr5:147863034
rs9325101
HTR4
A>G
117
16623
44.08
3.151e-11
0.5436
chr15:48426484
rs1426654
SLC24A5
A>G
229
27297
43.25
4.811e-11
0.6459
chr12:114685571
rs1270884
-
G>A
6228
455744
42.23
8.11e-11
1.125
chr12:114673774
rs2555015
-
T>C
5660
468749
41.67
1.082e-10
0.8894
chr11:32473807
rs3858455
-
T>C
4883
407586
41.34
1.281e-10
0.8878
chr2:136407479
rs1446585
R3HDM1
A>G
3076
263330
38.66
5.051e-10
0.8781
chr19:42393286
rs717225
ARHGEF1
A>G
178
21765
37.46
9.348e-10
0.6313
chr16:51488129
rs12325192
-
C>T
2126
186412
36.98
1.194e-09
0.8644
chr19:42392310
rs2288509
ARHGEF1
C>T
135
17409
35.27
2.876e-09
0.6002
chr15:48392165
rs1834640
-
A>G
285
31339
35.23
2.925e-09
0.7008
chr1:47103172
rs1258066
ATPAF1
T>C
122
16100
35.19
2.995e-09
0.5854
chr5:147671850
rs7724380
-
G>A
163
20020
35.03
3.244e-09
0.6285
chr2:135911422
Affx-17900027
RAB3GAP1
T>C
2771
237841
35.0
3.303e-09
0.8796
chr5:54280007
rs1508890
ESM1
C>A
146
18270
33.77
6.196e-09
0.6181
chr15:61356792
rs782956
RORA
T>G
232
26276
33.71
6.389e-09
0.681
chr19:42392441
rs16975619
ARHGEF1
T>C
163
19847
33.7
6.438e-09
0.634
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000008
Abnormal morphology of female internal genitalia
3/20
HP: 0000009
Functional abnormality of the bladder
6/20
HP: 0000014
Abnormality of the bladder
6/20
HP: 0000020
Urinary incontinence
8/20
HP: 0000078
Abnormality of the genital system
1/20
HP: 0000118
Phenotypic abnormality
4/20
HP: 0000130
Abnormality of the uterus
4/20
HP: 0000139
Uterine prolapse
5/20
HP: 0000142
Abnormal vagina morphology
5/20
HP: 0001438
Abnormality of abdomen morphology
5/20
HP: 0002012
Abnormality of the abdominal organs
1/20
HP: 0002034
Abnormality of the rectum
6/20
HP: 0002035
Rectal prolapse
7/20
HP: 0002242
Abnormal intestine morphology
5/20
HP: 0002250
Abnormal large intestine morphology
5/20
HP: 0003549
Abnormality of connective tissue
6/20
HP: 0010460
Abnormality of the female genitalia
1/20
HP: 0010936
Abnormality of the lower urinary tract
6/20
HP: 0010992
Stress urinary incontinence
8/20
HP: 0011024
Abnormality of the gastrointestinal tract
3/20
HP: 0012243
Abnormal reproductive system morphology
1/20
HP: 0012718
Morphological abnormality of the gastrointestinal tract
3/20
HP: 0012732
Anorectal anomaly
5/20
HP: 0025033
Abnormality of digestive system morphology
1/20
HP: 0025142
Constitutional symptom
2/20
HP: 0025487
Abnormality of bladder morphology
7/20
HP: 0031058
Impairment of activities of daily living
1/20
HP: 0031064
Impaired continence
1/20
HP: 0031105
Abnormal uterus morphology
4/20
HP: 0031607
Pelvic organ prolapse
8/20
HP: 0100645
Cystocele
8/20
HP: 0100672
Vaginal hernia
8/20
HP: 0100790
Hernia
6/20
HP: 0100822
Rectocele
8/20
HP: 0100823
Genital hernia
7/20
ID
Name
Top Correlation
HP: 0000079
Abnormality of the urinary system
0/20
HP: 0000119
Abnormality of the genitourinary system
0/20
HP: 0000812
Abnormal internal genitalia
0/20
HP: 0011277
Abnormality of the urinary system physiology
0/20
HP: 0025031
Abnormality of the digestive system
0/20