N99.0

Case	Control
132	460073

Case

Control

132

460073

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr18:5570894	rs73387939	EPB41L3	T>C	15	12340	34.75	3.757e-09	4.208
chr2:16127922	rs6719419	-	G>A	18	16851	33.44	7.342e-09	3.712
chr11:73288212	rs7128786	FAM168A	G>A	13	10504	30.82	2.829e-08	4.248
chr20:47155650	rs16993898	-	G>C	18	18347	28.56	9.1e-08	3.397
chr8:72142671	rs71525118	EYA1	A>G	19	20184	27.94	1.249e-07	3.268
chr6:30693514	rs79899687	-	G>A	27	34828	27.28	1.757e-07	2.751
chr12:119029974	rs79400168	-	G>A	24	29386	26.97	2.063e-07	2.878
chr6:30690265	rs75955575	TUBB	A>T	27	34904	26.6	2.503e-07	2.718
chr6:30701177	rs74295299	FLOT1	A>G	27	35460	26.43	2.732e-07	2.711
chr6:30711031	rs17719	IER3	C>T	27	35070	26.42	2.75e-07	2.709
chr6:30694761	rs78313884	-	C>T	27	35165	26.28	2.956e-07	2.702
chr6:30692539	rs1061397	TUBB	C>T	27	35170	26.27	2.966e-07	2.702
chr6:30706518	rs76617589	FLOT1	C>T	27	35465	26.24	3.014e-07	2.702
chr17:32298115	rs11080244	ASIC2	G>A	84	422783	26.21	3.06e-07	0.5223
chr6:30701109	rs74295298	FLOT1	G>A	27	35211	26.14	3.17e-07	2.696
chr20:47113577	rs112416087	-	A>G	19	20883	26.14	3.176e-07	3.155
chr6:30713430	rs58638768	-	G>C	27	35200	26.13	3.192e-07	2.695
chr6:30697616	rs17195712	FLOT1	C>T	27	35237	26.09	3.255e-07	2.694
chr5:170888111	rs74588350	-	T>C	13	11599	26.09	3.267e-07	3.841
chr6:30706548	rs74699059	FLOT1	A>C	27	35181	26.08	3.277e-07	2.694

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000032	Abnormality of male external genitalia	0/20
HP: 0000036	Abnormality of the penis	0/20
HP: 0000047	Hypospadias	0/20
HP: 0000069	Abnormality of the ureter	0/20
HP: 0000072	Hydroureter	0/20
HP: 0000077	Abnormality of the kidney	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000790	Hematuria	0/20
HP: 0000795	Abnormality of the urethra	0/20
HP: 0000811	Abnormal external genitalia	0/20
HP: 0001741	Phimosis	0/20
HP: 0001871	Abnormality of blood and blood-forming tissues	0/20
HP: 0001874	Abnormality of neutrophils	0/20
HP: 0001881	Abnormal leukocyte morphology	0/20
HP: 0001911	Abnormal granulocyte morphology	0/20
HP: 0001939	Abnormality of metabolism/homeostasis	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0003110	Abnormality of urine homeostasis	0/20
HP: 0003249	Genital ulcers	0/20
HP: 0010461	Abnormality of the male genitalia	0/20
HP: 0010935	Abnormality of the upper urinary tract	0/20
HP: 0010936	Abnormality of the lower urinary tract	0/20
HP: 0010974	Abnormal myeloid leukocyte morphology	0/20
HP: 0010987	Abnormal cellular immune system morphology	0/20
HP: 0011277	Abnormality of the urinary system physiology	0/20
HP: 0011893	Abnormal leukocyte count	0/20
HP: 0011991	Abnormal neutrophil count	0/20
HP: 0012085	Pyuria	0/20
HP: 0012211	Abnormal renal physiology	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012587	Macroscopic hematuria	0/20
HP: 0012614	Abnormal urine cytology	0/20
HP: 0025633	Abnormal ureter morphology	0/20
HP: 0032076	Abnormal male urethral meatus morphology	0/20
HP: 0032251	Abnormal immune system morphology	0/20
HP: 0032309	Abnormal granulocyte count	0/20
HP: 0100587	Abnormality of the preputium	0/20
HP: 0100627	Displacement of the urethral meatus	0/20

Name

Top Correlation

HP: 0000032

Abnormality of male external genitalia

0/20

HP: 0000036

Abnormality of the penis

0/20

HP: 0000047

Hypospadias

0/20

HP: 0000069