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ICD-10
HPO
Compare GWAS
Super Class
Other abnormal products of conception
Sub Class
Blighted ovum and nonhydatidiform mole
O02.0
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
122
460083
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr12:56722060
rs1918496
PAN2
G>T
16
11601
49.16
2.357e-12
5.067
chr6:144665357
rs6917261
UTRN
T>C
17
13098
48.21
3.831e-12
4.818
chr15:45491394
rs1648299
SHF
T>C
20
17139
47.55
5.349e-12
4.334
chr5:83128858
rs7709612
-
A>G
15
11079
44.81
2.177e-11
4.96
chr1:36557619
rs2236387
ADPRS
G>A
14
9956
44.33
2.772e-11
5.145
chr16:58713894
rs7193572
SLC38A7
A>G
14
10007
43.97
3.342e-11
5.116
chr11:107530433
rs73557781
ELMOD1
A>C
34
41591
43.67
3.878e-11
3.149
chr1:173579034
rs12065033
AL139142.2
C>T
18
15323
43.18
4.986e-11
4.338
chr8:40026791
rs11993724
-
G>A
21
19865
42.26
7.993e-11
3.924
chr9:4036061
rs511847
GLIS3
T>G
18
15530
42.08
8.757e-11
4.268
chr7:113340067
rs7802710
-
A>G
16
12852
41.99
9.155e-11
4.569
chr13:58552574
rs1436689
-
T>C
15
11670
41.4
1.238e-10
4.709
chr12:34516144
rs61331418
-
T>C
28
31889
40.55
1.913e-10
3.31
chr16:58134288
rs8060825
-
G>A
43
60957
40.26
2.22e-10
2.744
chr2:185043361
rs1997132
-
T>C
14
10614
40.15
2.349e-10
4.816
chr20:54034601
rs6024103
-
T>C
32
39471
39.81
2.802e-10
3.083
chr4:36095641
rs4833086
ARAP2
C>T
61
102466
39.4
3.46e-10
2.416
chr10:111855748
rs10400168
ADD3
C>A
16
13508
39.22
3.79e-10
4.377
chr5:52176010
rs11957074
ITGA1
A>G
22
22523
38.24
6.26e-10
3.618
chr13:58734166
rs12875310
-
T>C
20
19851
37.37
9.766e-10
3.75
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000078
Abnormality of the genital system
2/20
HP: 0000119
Abnormality of the genitourinary system
2/20
HP: 0001194
Abnormalities of placenta or umbilical cord
2/20
HP: 0001197
Abnormality of prenatal development or birth
1/20
HP: 0002686
Prenatal maternal abnormality
1/20
HP: 0007379
Neoplasm of the genitourinary tract
3/20
HP: 0010787
Genital neoplasm
3/20
HP: 0011433
High maternal serum chorionic gonadotropin
5/20
HP: 0011436
Abnormal maternal serum screening
2/20
HP: 0030714
Subchorionic thrombohematoma
2/20
HP: 0031502
Trophoblastic tumor
5/20
HP: 0100767
Abnormality of the placenta
2/20
HP: 0100768
Choriocarcinoma
5/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000951
Abnormality of the skin
0/20
HP: 0001062
Atypical nevus
0/20
HP: 0001574
Abnormality of the integument
0/20
HP: 0002664
Neoplasm
0/20
HP: 0003764
Nevus
0/20
HP: 0010785
Gonadal neoplasm
0/20
HP: 0011121
Abnormality of skin morphology
0/20
HP: 0011355
Localized skin lesion
0/20
HP: 0011793
Neoplasm by anatomical site
0/20
HP: 0032165
Placental mesenchymal dysplasia
0/20
HP: 0032192
Hydatidiform mole
0/20
HP: 0100728
Germ cell neoplasia
0/20