Case | Control |
---|---|
199 | 460006 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
---|---|---|---|---|---|---|---|---|
chr2:85439847 | rs114504655 | TCF7L1 | G>A | 22 | 15593 | 33.19 | 8.374e-09 | 3.287 |
chr7:57238280 | rs117517657 | - | C>G | 30 | 25157 | 31.93 | 1.598e-08 | 2.786 |
chr14:75923157 | rs76076105 | JDP2 | C>T | 18 | 12171 | 28.82 | 7.949e-08 | 3.376 |
chr18:69389421 | rs10514021 | - | C>T | 52 | 57723 | 28.48 | 9.472e-08 | 2.16 |
chr8:40997875 | rs77900873 | - | C>T | 19 | 13620 | 27.69 | 1.423e-07 | 3.215 |
chr6:112285867 | rs585057 | - | C>T | 214 | 359470 | 27.66 | 1.449e-07 | 1.647 |
chr14:75889674 | rs12323519 | - | C>T | 17 | 11669 | 27.08 | 1.95e-07 | 3.363 |
chr3:174734880 | rs73032325 | NAALADL2 | C>G | 39 | 40078 | 25.78 | 3.831e-07 | 2.29 |
chr4:129580629 | rs72916308 | - | C>T | 17 | 12415 | 23.86 | 1.034e-06 | 3.145 |
chr17:74045681 | rs7210777 | SRP68 | T>C | 16 | 11431 | 23.43 | 1.293e-06 | 3.211 |
chr1:86571544 | rs75773592 | COL24A1 | G>T | 23 | 19759 | 23.38 | 1.331e-06 | 2.705 |
chr8:115887671 | rs111644667 | - | A>C | 17 | 12666 | 22.94 | 1.669e-06 | 3.082 |
chr2:1753375 | rs10164792 | - | G>A | 168 | 277026 | 22.42 | 2.195e-06 | 1.588 |
chr4:165798690 | rs17487030 | APELA | T>C | 33 | 33686 | 22.35 | 2.267e-06 | 2.299 |
chr18:67364330 | rs12962466 | DOK6 | G>T | 52 | 62273 | 22.24 | 2.4e-06 | 1.981 |
chr3:40704175 | rs4428154 | - | G>A | 34 | 35116 | 22.04 | 2.675e-06 | 2.261 |
chr1:216612110 | rs6696890 | - | A>G | 18 | 14416 | 21.77 | 3.072e-06 | 2.926 |
chr9:110190859 | rs41313337 | - | G>T | 67 | 87552 | 21.67 | 3.239e-06 | 1.839 |
chr7:119053388 | rs75121310 | - | C>T | 30 | 29845 | 21.65 | 3.273e-06 | 2.351 |
chr18:69391105 | rs117455320 | - | C>T | 36 | 38798 | 21.06 | 4.446e-06 | 2.18 |
ID | Name | Top Correlation |
---|---|---|
HP: 0004397 | Ectopic anus | 1/20 |
HP: 0025025 | Rectovestibular fistula | 1/20 |