R15

Case	Control
2600	457594

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr7:29314030	rs116925573	AC004593.2	A>C	239	30560	27.53	1.545e-07	1.414
chr10:105299611	rs6584555	NEURL1	T>C	751	159519	26.92	2.124e-07	0.8154
chr7:101144146	rs6957322	COL26A1	C>G	1074	166466	26.57	2.543e-07	1.192
chr9:14003848	rs35960176	-	T>C	2239	369053	23.43	1.297e-06	1.143
chr20:46656060	rs6066587	-	C>G	1514	300244	23.1	1.534e-06	0.8643
chr3:11719052	rs67149340	VGLL4	C>A	1861	363354	22.97	1.645e-06	0.8716
chr3:20421625	rs73027381	-	C>T	691	104059	22.56	2.038e-06	1.214
chr4:11377393	rs10031133	-	T>C	1237	196067	22.47	2.133e-06	1.166
chr8:20412168	rs4921723	-	T>C	594	127027	22.39	2.223e-06	0.8139
chr10:73111408	rs780668	SLC29A3	T>C	1272	254562	22.36	2.262e-06	0.8592
chr5:14741048	rs16903680	ANKH	C>T	284	38598	22.01	2.717e-06	1.331
chr15:36989578	rs117638434	C15orf41	C>T	113	13070	21.94	2.817e-06	1.558
chr4:11356965	rs62298088	-	C>T	1108	174313	21.41	3.703e-06	1.169
chr5:62238258	rs17476228	-	C>T	743	155192	21.31	3.91e-06	0.8332
chr11:34460472	rs7943316	-	T>A	1666	326266	21.03	4.519e-06	0.8734
chr13:80568497	rs73236809	-	C>T	199	25899	20.87	4.913e-06	1.391
chr20:46671528	rs6018882	-	G>A	1228	244236	20.83	5.009e-06	0.8612
chr20:40508253	rs6093529	-	G>C	215	51785	20.47	6.071e-06	0.7304
chr19:33753555	rs4616402	-	G>A	1140	228810	20.26	6.755e-06	0.8605
chr14:54045723	rs2810064	-	T>G	846	173565	20.09	7.372e-06	0.8453

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds Ratio

chr7:29314030

rs116925573

AC004593.2

A>C

239

30560

27.53

1.545e-07

1.414

chr10:105299611

rs6584555

NEURL1

T>C

751

159519

26.92

2.124e-07

0.8154

chr7:101144146

rs6957322

COL26A1

C>G

1074

166466

26.57

2.543e-07

1.192

chr9:14003848

rs35960176

-

T>C

2239

369053

23.43

1.297e-06

1.143

chr20:46656060

rs6066587

-

C>G

1514

300244

23.1

1.534e-06

0.8643

chr3:11719052

rs67149340

VGLL4

C>A

1861

363354

22.97

1.645e-06

0.8716

chr3:20421625

rs73027381

-

C>T

691

104059

22.56

2.038e-06

1.214

chr4:11377393

rs10031133

-

T>C

1237

196067

22.47

2.133e-06

1.166

chr8:20412168

rs4921723

-

T>C

594

127027

22.39

2.223e-06

0.8139

chr10:73111408

rs780668

SLC29A3

T>C

1272

254562

22.36

2.262e-06

0.8592

chr5:14741048

rs16903680

ANKH

C>T

284

38598

22.01

2.717e-06

1.331

chr15:36989578

rs117638434

C15orf41

C>T

113

13070

21.94

2.817e-06

1.558

chr4:11356965

rs62298088

-

C>T

1108

174313

21.41

3.703e-06

1.169

chr5:62238258

rs17476228

-

C>T

743

155192

21.31

3.91e-06

0.8332

chr11:34460472

rs7943316

-

T>A

1666

326266

21.03

4.519e-06

0.8734

chr13:80568497

rs73236809

-

C>T

199

25899

20.87

4.913e-06

1.391

chr20:46671528

rs6018882

-

G>A

1228

244236

20.83

5.009e-06

0.8612

chr20:40508253

rs6093529

-

G>C

215

51785

20.47

6.071e-06

0.7304

chr19:33753555

rs4616402

-

G>A

1140

228810

20.26

6.755e-06

0.8605

chr14:54045723

rs2810064

-

T>G

846

173565

20.09

7.372e-06

0.8453

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002019	Constipation	0/20
HP: 0002034	Abnormality of the rectum	0/20
HP: 0002035	Rectal prolapse	0/20
HP: 0002242	Abnormal intestine morphology	0/20
HP: 0002250	Abnormal large intestine morphology	0/20
HP: 0002607	Bowel incontinence	0/20
HP: 0004378	Abnormality of the anus	0/20
HP: 0011024	Abnormality of the gastrointestinal tract	0/20
HP: 0011458	Abdominal symptom	0/20
HP: 0012390	Anal fissure	0/20
HP: 0012700	Abnormal large intestine physiology	0/20
HP: 0012701	Bowel urgency	0/20
HP: 0012718	Morphological abnormality of the gastrointestinal tract	0/20
HP: 0012732	Anorectal anomaly	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025032	Abnormality of digestive system physiology	0/20
HP: 0025033	Abnormality of digestive system morphology	0/20
HP: 0025142	Constitutional symptom	0/20
HP: 0031058	Impairment of activities of daily living	0/20
HP: 0031064	Impaired continence	0/20

Faecal incontinence

R15

Case/Control GWAS ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Faecal incontinence

R15

Case/Control GWAS ⓘ

Links

Statistics

Top SNP Information Show Table

Associated Phenotypes ⓘ Shared SNP phenotypes No shared SNP phenotypes

Case/Control GWAS ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ