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ICD-10
HPO
Compare GWAS
Super Class
Surgical operation and other surgical procedures as the cause of abnormal reaction of the patient, or of later complication, without mention of misadventure at the time of the procedure
Sub Class
Other surgical procedures
Y83.8
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
1050
459155
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr6:396321
rs12203592
IRF4
C>T
577
200634
47.8
4.728e-12
1.399
chr8:113378193
rs35255772
CSMD3
C>T
159
43971
40.23
2.252e-10
1.678
chr20:38158740
rs80247023
-
G>A
50
9908
35.79
2.201e-09
2.302
chr4:170378579
rs116098516
NEK1
T>G
47
9718
30.11
4.079e-08
2.204
chr15:59726577
rs78567355
FAM81A
A>G
247
80355
28.8
8.037e-08
1.435
chr6:421281
rs62389423
-
G>A
456
163585
28.47
9.528e-08
1.324
chr12:99033050
rs77914039
IKBIP
G>A
89
23135
28.11
1.143e-07
1.764
chr2:65398107
rs79182367
-
T>C
120
34120
26.73
2.344e-07
1.619
chr8:113362045
rs13273261
CSMD3
T>G
117
33211
26.15
3.164e-07
1.62
chr6:32188099
rs430916
NOTCH4
C>T
408
229108
25.97
3.47e-07
0.7562
chr3:186648906
rs2041966
ST6GAL1
A>G
462
168012
25.72
3.951e-07
1.304
chr5:33951693
rs16891982
SLC45A2
G>C
89
66972
25.51
4.404e-07
0.5824
chr8:16124762
rs80156017
MSR1
T>C
164
50464
25.46
4.52e-07
1.504
chr16:35077080
rs17788654
-
A>G
1022
408266
25.27
4.971e-07
1.242
chr4:25822281
rs10939083
SEL1L3
G>A
42
39747
25.17
5.24e-07
0.466
chr5:33590675
rs6878028
ADAMTS12
G>A
149
45052
25.06
5.545e-07
1.526
chr20:37552926
rs79424561
-
C>T
101
28028
24.98
5.79e-07
1.657
chr15:94334944
rs11074233
-
A>G
1005
401426
24.59
7.099e-07
1.239
chr17:3066630
rs113144981
-
G>A
51
11674
24.55
7.224e-07
1.994
chr20:62737888
rs41278242
MYT1
G>A
126
36908
24.46
7.59e-07
1.57
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000077
Abnormality of the kidney
1/20
HP: 0000118
Phenotypic abnormality
2/20
HP: 0000152
Abnormality of head or neck
2/20
HP: 0000153
Abnormality of the mouth
2/20
HP: 0000234
Abnormality of the head
2/20
HP: 0000271
Abnormality of the face
2/20
HP: 0000315
Abnormality of the orbital region
2/20
HP: 0000326
Abnormality of the maxilla
10/20
HP: 0000357
Abnormal location of ears
11/20
HP: 0000492
Abnormal eyelid morphology
2/20
HP: 0000598
Abnormality of the ear
1/20
HP: 0000621
Entropion
1/20
HP: 0000765
Abnormality of the thorax
2/20
HP: 0000766
Abnormality of the sternum
1/20
HP: 0000768
Pectus carinatum
3/20
HP: 0000917
Superior pectus carinatum
15/20
HP: 0000929
Abnormal skull morphology
1/20
HP: 0001626
Abnormality of the cardiovascular system
1/20
HP: 0001871
Abnormality of blood and blood-forming tissues
2/20
HP: 0001929
Reduced factor XI activity
12/20
HP: 0002597
Abnormality of the vasculature
1/20
HP: 0002664
Neoplasm
3/20
HP: 0002715
Abnormality of the immune system
2/20
HP: 0002898
Embryonal neoplasm
2/20
HP: 0003250
Aplasia of the vagina
13/20
HP: 0003318
Cervical spine hypermobility
20/20
HP: 0009792
Teratoma
2/20
HP: 0010722
Asymmetry of the ears
20/20
HP: 0010758
Abnormality of the premaxilla
15/20
HP: 0010759
Prominence of the premaxilla
20/20
HP: 0010785
Gonadal neoplasm
1/20
HP: 0010935
Abnormality of the upper urinary tract
1/20
HP: 0010978
Abnormality of immune system physiology
2/20
HP: 0010989
Abnormality of the intrinsic pathway
6/20
HP: 0011026
Aplasia/Hypoplasia of the vagina
12/20
HP: 0011636
Abnormal coronary artery origin
12/20
HP: 0011640
Single coronary artery origin
16/20
HP: 0011792
Neoplasm by histology
1/20
HP: 0011793
Neoplasm by anatomical site
3/20
HP: 0011821
Abnormality of facial skeleton
1/20
HP: 0012210
Abnormal renal morphology
1/20
HP: 0012673
Aplasia of the upper vagina
20/20
HP: 0025015
Abnormal vascular morphology
1/20
HP: 0025031
Abnormality of the digestive system
2/20
HP: 0025361
Abnormality of medullary pyramid morphology
8/20
HP: 0025362
Renal medullary pyramid hypoplasia
8/20
HP: 0030669
Abnormal ocular adnexa morphology
2/20
HP: 0030755
Craniofacial teratoma
20/20
HP: 0031738
Mechanical entropion
20/20
HP: 0032039
Abnormality of the ocular adnexa
2/20
HP: 0040093
Asymmetry of the position of the ears
20/20
HP: 0100728
Germ cell neoplasia
2/20
HP: 0100957
Abnormal renal medulla morphology
8/20
HP: 0410322
Bacteria allergy
20/20
ID
Name
Top Correlation
HP: 0000008
Abnormal morphology of female internal genitalia
0/20
HP: 0000078
Abnormality of the genital system
0/20
HP: 0000079
Abnormality of the urinary system
0/20
HP: 0000119
Abnormality of the genitourinary system
0/20
HP: 0000142
Abnormal vagina morphology
0/20
HP: 0000356
Abnormality of the outer ear
0/20
HP: 0000377
Abnormality of the pinna
0/20
HP: 0000464
Abnormality of the neck
0/20
HP: 0000812
Abnormal internal genitalia
0/20
HP: 0000924
Abnormality of the skeletal system
0/20
HP: 0000925
Abnormality of the vertebral column
0/20
HP: 0001627
Abnormal heart morphology
0/20
HP: 0001928
Abnormality of coagulation
0/20
HP: 0001939
Abnormality of metabolism/homeostasis
0/20
HP: 0003256
Abnormality of the coagulation cascade
0/20
HP: 0003319
Abnormality of the cervical spine
0/20
HP: 0006704
Abnormal coronary artery morphology
0/20
HP: 0007379
Neoplasm of the genitourinary tract
0/20
HP: 0009121
Abnormal axial skeleton morphology
0/20
HP: 0010460
Abnormality of the female genitalia
0/20
HP: 0010787
Genital neoplasm
0/20
HP: 0011004
Abnormal systemic arterial morphology
0/20
HP: 0011842
Abnormality of skeletal morphology
0/20
HP: 0012243
Abnormal reproductive system morphology
0/20
HP: 0012393
Allergy
0/20
HP: 0030680
Abnormality of cardiovascular system morphology
0/20
HP: 0030791
Abnormal jaw morphology
0/20
HP: 0031703
Abnormal ear morphology
0/20
HP: 0100326
Immunologic hypersensitivity
0/20