Y86

Case	Control
120	460074

Case

Control

120

460074

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr4:289272	rs112132883	ZNF732	C>T	38	61119	34.93	3.416e-09	2.72
chr1:114623835	rs116000532	-	G>T	16	17366	32.5	1.189e-08	3.933
chr12:68789790	rs117338213	-	G>A	17	19260	31.33	2.181e-08	3.713
chr5:90647228	rs115382731	-	A>G	12	11431	29.53	5.493e-08	4.362
chr11:59210795	rs17153732	OR5A1	A>G	11	10653	25.96	3.486e-07	4.237
chr12:68708604	rs77147615	MDM1	T>C	24	35867	25.69	4.006e-07	2.839
chr20:2310291	rs214821	AL121899.2	C>T	11	10812	25.36	4.747e-07	4.177
chr20:34632186	rs76129660	-	G>A	32	55649	24.12	9.053e-07	2.461
chr5:151543209	rs12516909	-	T>G	36	66423	23.68	1.137e-06	2.344
chr20:23623363	rs2424583	-	C>A	15	18397	23.56	1.208e-06	3.378
chr10:743027	rs74115307	-	C>G	32	56419	23.45	1.28e-06	2.432
chr17:26473608	rs62067261	NLK	A>G	47	96331	23.44	1.289e-06	2.152
chr10:131237574	rs78078189	-	A>G	11	11400	23.3	1.387e-06	3.969
chr18:39478862	rs113556882	-	G>A	16	20562	22.97	1.643e-06	3.227
chr13:104427435	rs17399664	-	A>G	19	26877	22.59	2.002e-06	2.951
chr11:45893630	rs113851044	CRY2	C>T	10	9948	22.57	2.03e-06	4.111
chr1:114444444	rs34751342	AP4B1	T>G	25	40281	22.56	2.035e-06	2.624
chr1:39010464	rs115201237	-	C>T	41	81052	22.54	2.055e-06	2.207
chr13:27565982	rs114487153	-	C>T	14	16950	22.51	2.088e-06	3.414
chr6:117211108	rs339332	RFX6	T>C	20	29170	22.33	2.292e-06	2.868

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0003084	Fractures of the long bones	3/20

Name

Top Correlation

HP: 0003084

Fractures of the long bones

3/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000370	Abnormality of the middle ear	0/20
HP: 0000388	Otitis media	0/20
HP: 0000598	Abnormality of the ear	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0001197	Abnormality of prenatal development or birth	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0001939	Abnormality of metabolism/homeostasis	0/20
HP: 0001952	Glucose intolerance	0/20
HP: 0002011	Morphological central nervous system abnormality	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002204	Pulmonary embolism	0/20
HP: 0002383	Encephalitis	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002659	Increased susceptibility to fractures	0/20
HP: 0002686	Prenatal maternal abnormality	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002757	Recurrent fractures	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0003330	Abnormal bone structure	0/20
HP: 0009800	Maternal diabetes	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011014	Abnormal glucose homeostasis	0/20
HP: 0011025	Abnormal cardiovascular system physiology	0/20
HP: 0011314	Abnormality of long bone morphology	0/20
HP: 0011450	Unusual CNS infection	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0011843	Abnormality of skeletal physiology	0/20
HP: 0011844	Abnormal appendicular skeleton morphology	0/20
HP: 0012337	Abnormal homeostasis	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0030163	Abnormal vascular physiology	0/20
HP: 0030875	Abnormality of pulmonary circulation	0/20
HP: 0031703	Abnormal ear morphology	0/20
HP: 0032101	Unusual infection	0/20
HP: 0032158	Unusual infection by anatomical site	0/20

Name

Top Correlation

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000152

Abnormality of head or neck

0/20

HP: 0000234

Abnormality of the head

0/20

HP: 0000370